RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 KCNS2Q9ULS6 477 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 POLR1DQ9Y2S0 133 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 CDH10Q9Y6N8 788 aa25.83■■□□□ 1.73
SSSCA1-207ENST00000533115 OR6C6A6NF89 314 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 GASTP01350 101 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 IL2RGP31785 369 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 PPP1R8Q12972 351 aaKnown RBP25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 MEP1BQ16820 701 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 CLEC12AQ5QGZ9 265 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 OR2T5Q6IEZ7 315 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 NPEPL1Q8NDH3 523 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 OR52L1Q8NGH7 329 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 OR2T29Q8NH02 315 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 OR1F12Q8NHA8 337 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 LRGUKQ96M69 825 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 THTPAQ9BU02 230 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 DECR2Q9NUI1 292 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 GRIP1Q9Y3R0 1128 aa25.82■■□□□ 1.72
SSSCA1-207ENST00000533115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP25.81■■□□□ 1.723e-7■■■■■ 26.8
SSSCA1-207ENST00000533115 PLSCR5A0PG75 271 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 RER1O15258 196 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 RP2O75695 350 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 TGFAP01135 160 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 TUBG1P23258 451 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 TSTQ16762 297 aaKnown RBP25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 SLC35F1Q5T1Q4 408 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 ZSCAN2Q7Z7L9 614 aaPredicted RBP25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 ZBTB46Q86UZ6 589 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 SDR9C7Q8NEX9 313 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 SLC7A6Q92536 515 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 REEP1Q9H902 201 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 TUBG2Q9NRH3 451 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 CYSLTR2Q9NS75 346 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 VNN3Q9NY84 501 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 ATPIF1Q9UII2 106 aa25.81■■□□□ 1.72
SSSCA1-207ENST00000533115 OR6C68A6NDL8 312 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 ACOT8O14734 319 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 LIPAP38571 399 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 HIST1H3AP68431 136 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 KHDRBS1Q07666 443 aaKnown RBP eCLIP25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 DBPQ10586 325 aaPredicted RBP25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 HIST2H3PS2Q5TEC6 136 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 HIST2H3AQ71DI3 136 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 GJC3Q8NFK1 279 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 OR52E2Q8NGJ4 325 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 IL20Q9NYY1 176 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 CGGBP1Q9UFW8 167 aaPredicted RBP25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 SAMHD1Q9Y3Z3 626 aaKnown RBP25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 LHFPL6Q9Y693 200 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 U3KQV3 271 aa25.8■■□□□ 1.72
SSSCA1-207ENST00000533115 SVEP1Q4LDE5 3571 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 TPD52L2O43399 206 aaKnown RBP25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 PPIHO43447 177 aaKnown RBP25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 CDC14BO60729 498 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 IGHV1-46P01743 117 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 RAP2AP10114 183 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 GSTM3P21266 225 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 IGFBP5P24593 272 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 CRYBB2P43320 205 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 TEKQ02763 1124 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 TRAP1Q12931 704 aaKnown RBP25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 MICAQ29983 383 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 FAM209AQ5JX71 171 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 RASSF6Q6ZTQ3 369 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 AQP11Q8NBQ7 271 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 SLC26A10Q8NG04 563 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 BEX2Q9BXY8 128 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 PLA2G12AQ9BZM1 189 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 FN3KQ9H479 309 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 POFUT1Q9H488 388 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 SAP30LQ9HAJ7 183 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 LPAR3Q9UBY5 353 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 KLHL21Q9UJP4 597 aa25.79■■□□□ 1.72
SSSCA1-207ENST00000533115 IGHV1-69-2A0A0G2JMI3 117 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 BHLHE40O14503 412 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 SPRY3O43610 288 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 PSG7Q13046 419 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 CCNIQ14094 377 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 C1orf159Q96HA4 380 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 COG8Q96MW5 612 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 DCLRE1CQ96SD1 692 aaKnown RBP25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 SHARPINQ9H0F6 387 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 STARD10Q9Y365 291 aa25.78■■□□□ 1.72
SSSCA1-207ENST00000533115 ZSCAN5BA6NJL1 495 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 UBOX5O94941 541 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 TFP02787 698 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 COX10Q12887 443 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 SLC36A3Q495N2 470 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 CORO6Q6QEF8 472 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 USP51Q70EK9 711 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 LINC01356Q8N9X3 169 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 OR8D4Q8NGM9 314 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 DGCR6LQ9BY27 220 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 HDHD2Q9H0R4 259 aa25.77■■□□□ 1.72
SSSCA1-207ENST00000533115 CUBNO60494 3623 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 TIMM8AO60220 97 aaPredicted RBP25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 ADH4P08319 380 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 DBHP09172 617 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 ZMAT1Q5H9K5 638 aa25.76■■□□□ 1.71
SSSCA1-207ENST00000533115 ADGRG5Q8IZF4 528 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms