RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TSSK6Q9BXA6 273 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 ELOVL3Q9HB03 270 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 SLCO1C1Q9NYB5 712 aa13.16□□□□□ -0.3
CPSF1-210ENST00000532935 ARRDC5A6NEK1 342 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 OR6C6A6NF89 314 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 ABHD16AO95870 558 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 NGFP01138 241 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 IGHV3-13P01766 116 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 TP53P04637 393 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-210ENST00000532935 HOXB4P17483 251 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-210ENST00000532935 USF1P22415 310 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-210ENST00000532935 NR4A2P43354 598 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 ERFP50548 548 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 ARHGDIAP52565 204 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 PPP1CBP62140 327 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 COX10Q12887 443 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 ZNF718Q3SXZ3 478 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 CCDC92Q53HC0 331 aaPredicted RBP13.15□□□□□ -0.3
CPSF1-210ENST00000532935 ARL9Q6T311 187 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 CD300LDQ6UXZ3 194 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 ZNF786Q8N393 782 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 LNX2Q8N448 690 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 CYB561A3Q8NBI2 242 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 OR4Q3Q8NH05 313 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 OR1F12Q8NHA8 337 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 SLC25A40Q8TBP6 338 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 SNX33Q8WV41 574 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 DDOQ99489 341 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 FEVQ99581 238 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 OR2J1Q9GZK6 312 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 YY1AP1Q9H869 796 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 HINT3Q9NQE9 182 aaKnown RBP13.15□□□□□ -0.3
CPSF1-210ENST00000532935 ARMC1Q9NVT9 282 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 BAIAP2Q9UQB8 552 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 LHFPL6Q9Y693 200 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 NAV3Q8IVL0 2385 aa13.15□□□□□ -0.3
CPSF1-210ENST00000532935 H3BSA7 217 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 RER1O15258 196 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 TFP02787 698 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 HPXP02790 462 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 GCH1P30793 250 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 MPV17P39210 176 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 HIST1H3AP68431 136 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 TEKQ02763 1124 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 GGTLC2Q14390 218 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 KPNB1Q14974 876 aaKnown RBP13.14□□□□□ -0.31
CPSF1-210ENST00000532935 MOGQ16653 247 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 TMEM249Q2WGJ8 235 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 SLC36A3Q495N2 470 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 ZNF362Q5T0B9 420 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-210ENST00000532935 HIST2H3PS2Q5TEC6 136 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 MBNL2Q5VZF2 373 aaKnown RBP13.14□□□□□ -0.31
CPSF1-210ENST00000532935 TMEM154Q6P9G4 183 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 CORO6Q6QEF8 472 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 HIST2H3AQ71DI3 136 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 SLC37A3Q8NCC5 494 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 PAPD5Q8NDF8 572 aaKnown RBP13.14□□□□□ -0.31
CPSF1-210ENST00000532935 ZNF540Q8NDQ6 660 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 GJC3Q8NFK1 279 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 OR2T33Q8NG76 320 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 KLF14Q8TD94 323 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-210ENST00000532935 IPCEF1Q8WWN9 437 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-210ENST00000532935 SLC7A6Q92536 515 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 STMN2Q93045 179 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 SLCO4A1Q96BD0 722 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 BPESC1Q9GZL8 116 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 RNPEPL1Q9HAU8 725 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 TBCCD1Q9NVR7 557 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 PDP1Q9P0J1 537 aaPredicted RBP13.14□□□□□ -0.31
CPSF1-210ENST00000532935 ATPIF1Q9UII2 106 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 MALRD1Q5VYJ5 2156 aa13.14□□□□□ -0.31
CPSF1-210ENST00000532935 C17orf100A8MU93 164 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 INAFM1C9JVW0 142 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 LYNX1G3V0Z9 82 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 CD5LO43866 347 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 E2F6O75461 281 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 LYNX1P0DP58 116 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 GIFP27352 417 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 PYCR1P32322 319 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 TMEM255AQ5JRV8 349 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 ELFN2Q5R3F8 820 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 PROKR2Q8NFJ6 384 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 OR2T4Q8NH00 348 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 POM121Q96HA1 1249 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 DNAJB9Q9UBS3 223 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 KLHL21Q9UJP4 597 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 GRIP1Q9Y3R0 1128 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 ABCA2Q9BZC7 2435 aa13.13□□□□□ -0.31
CPSF1-210ENST00000532935 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.13□□□□□ -0.313e-9■■■■□ 19.5
CPSF1-210ENST00000532935 TANC2Q9HCD6 1990 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 H3BN98 237 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 NCR1O76036 304 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 MT-ND5P03915 603 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 DBHP09172 617 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 GGT2P36268 569 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 MAGEB1P43366 347 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 PPP2R2BQ00005 443 aa13.12□□□□□ -0.31
CPSF1-210ENST00000532935 RIN1Q13671 783 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms