RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 OR52N5Q8NH56 324 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 PFN4Q8NHR9 129 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 ACOT11Q8WXI4 607 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 MCUR1Q96AQ8 359 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 TMEM186Q96B77 213 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 PYURFQ96I23 114 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 TXNDC15Q96J42 360 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 NSMCE2Q96MF7 247 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 MUS81Q96NY9 551 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 ALKBH3Q96Q83 286 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 OR2M2Q96R28 347 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 EMC6Q9BV81 110 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 LINC00470Q9BZP3 86 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 LIME1Q9H400 295 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 ESRP2Q9H6T0 727 aaKnown RBP5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 PLEKHF2Q9H8W4 249 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 FAM118AQ9NWS6 357 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 MED29Q9NX70 200 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 TAS2R5Q9NYW4 299 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 CD300AQ9UGN4 299 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 ENPP4Q9Y6X5 453 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 V9GYQ6 96 aa5.05□□□□□ -1.6
HMGB1P42-201ENST00000532126 C13orf42A0A1B0GVH6 325 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 A0A1W2PR80 420 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 A0A1W2PRG6 482 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 EFCAB9A8MZ26 197 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 hCG_2039718K7EN88 272 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 M0R3G1 203 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 MAGEB3O15480 346 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 CLOCKO15516 846 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 TRIAP1O43715 76 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 PDE5AO76074 875 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 BCL10O95999 233 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 RAF1P04049 648 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 H1F0P07305 194 aaKnown RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 T-ENOLP0DO92 83 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 SAGP10523 405 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ZNF182P17025 639 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ITGA2P17301 1181 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 DNASE1P24855 282 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 GDNFP39905 211 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 AQP2P41181 271 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ZNF83P51522 516 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 FOXG1P55316 489 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 BIDP55957 195 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 SMIM11AP58511 58 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 PRPS1P60891 318 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 UBE2NP61088 152 aaKnown RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 RPL18Q07020 188 aaKnown RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 DGCR6Q14129 220 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 HIKESHIQ53FT3 197 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ZMAT1Q5H9K5 638 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 FGD3Q5JSP0 725 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 NCMAPQ5T1S8 102 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 PAMR1Q6UXH9 720 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ZNF704Q6ZNC4 412 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC35D2Q76EJ3 337 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 LINGO2Q7L985 606 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 PRSS45Q7RTY3 260 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 TSEN54Q7Z6J9 526 aaKnown RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 MED12LQ86YW9 2145 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 NRMQ8IXM6 262 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 C20orf196Q8IYI0 205 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 RNF113BQ8IZP6 322 aaKnown RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 TMEM123Q8N131 208 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 FAM86B1Q8N7N1 296 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 OR1K1Q8NGR3 316 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 OR6X1Q8NH79 312 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 BPIFA2Q96DR5 249 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 AJUBAQ96IF1 538 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 C7orf34Q96L11 122 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ADAD1Q96M93 576 aaKnown RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 SSX3Q99909 188 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 C1QTNF6Q9BXI9 259 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ANKRD19PQ9H560 264 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 UBTD1Q9HAC8 227 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 NMNAT1Q9HAN9 279 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 CRLF2Q9HC73 371 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 B3GAT2Q9NPZ5 323 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC17A5Q9NRA2 495 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 CENPMQ9NSP4 180 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 MAN2C1Q9NTJ4 1040 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 TAS2R1Q9NYW7 299 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ST6GALNAC2Q9UJ37 374 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 PRPF19Q9UMS4 504 aaKnown RBP5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 DHDHQ9UQ10 334 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 PLEKHA6Q9Y2H5 1048 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 AMDHD2Q9Y303 409 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 RNF115Q9Y4L5 304 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC25A15Q9Y619 301 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 U3KQV3 271 aa5.04□□□□□ -1.6
HMGB1P42-201ENST00000532126 ADGRG4Q8IZF6 3080 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 NOTCH2Q04721 2471 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 PKDREJQ9NTG1 2253 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 A0A087WUU8 490 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 A0A1W2PPR1 153 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 DPRXA6NFQ7 191 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 MCIDASD6RGH6 385 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 RPL36A-HNRNPH2H7BZ11 118 aa5.03□□□□□ -1.6
HMGB1P42-201ENST00000532126 M0R1B8 84 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms