RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 C12orf77C9JDV5 145 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 ANKRD63C9JTQ0 380 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 M0QXV9 152 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CDX4O14627 284 aaPredicted RBP3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 AGPAT2O15120 278 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 NUPL2O15504 423 aaKnown RBP3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CYTH3O43739 400 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 IDH3BO43837 385 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 SNAPINO95295 136 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 TNFAIP8O95379 198 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 TBX6O95947 436 aaPredicted RBP3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 ALPLP05186 524 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 HOXC4P09017 264 aaPredicted RBP3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 OR5AL1P0C617 328 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 ZSCAN5DPP0CG00 497 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 VDAC1P21796 283 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CXCR2P25025 360 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 F2RP25116 425 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 GNRHRP30968 328 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 RBM34P42696 430 aaKnown RBP3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 KLK7P49862 253 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 SERPINB8P50452 374 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CEBPGP53567 150 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 UBE2KP61086 200 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 KDSRQ06136 332 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 C2orf54Q08AI8 447 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 QPRTQ15274 297 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 PRR4Q16378 134 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 TMEM30BQ3MIR4 351 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 OR2B11Q5JQS5 317 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 C1orf146Q5VVC0 180 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF324BQ6AW86 544 aaPredicted RBP3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 UNQ9370/PRO34162Q6UXP9 181 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CBLN2Q8IUK8 224 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 BOD1L2Q8IYS8 172 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 DAW1Q8N136 415 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CYP4Z2PQ8N1L4 340 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 ZNF614Q8N883 585 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 MDS2Q8NDY4 140 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 OR6Q1Q8NGQ2 317 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CCDC26Q8TAB7 109 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 DNAJB3Q8WWF6 145 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 TMEM230Q96A57 120 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 SCGB3A2Q96PL1 93 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CCDC28BQ9BUN5 200 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 VCX3BQ9H321 246 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CD274Q9NZQ7 290 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CTSZQ9UBR2 303 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 CES1P1Q9UKY3 287 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 VSIG4Q9Y279 399 aa3.39□□□□□ -1.87
AC055878.1-201ENST00000531858 IGLV7-46A0A075B6I9 117 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 A0A0G2JLM5 398 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 A0A0G2JRQ6 117 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 A0A1B0GVI7 797 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 A6NIZ1 184 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 RPL37AP8A6NKH3 93 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 GOLGA8JA6NMD2 632 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 GOLGA8KD6RF30 607 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ANKRD65E5RJM6 399 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 GOLGA8MH3BSY2 632 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 K7EMT4 169 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 K7EN84 100 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 SULT1C2O00338 296 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 NME4O00746 187 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC16A4O15374 487 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 SLC16A7O60669 478 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 TBL1XO60907 577 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 LYPLA1O75608 230 aaPredicted RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 RBBP9O75884 186 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 SRP72O76094 671 aaKnown RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 RCBTB2O95199 551 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 DEXIO95424 95 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 IGLV1-44P01699 117 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ORM1P02763 201 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 MELTFP08582 738 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 GOLGA8HP0CJ92 632 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 GIMD1P0DJR0 217 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 HLA-GP17693 338 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 USF1P22415 310 aaPredicted RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 HRH1P35367 487 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 CEACAM3P40198 252 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 CDKN2CP42773 168 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 RORCP51449 518 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 LINC00205P59089 165 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 ERVFC1-1P60608 527 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 RAP1BP61224 184 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 SELENOTP62341 195 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 BASP1P80723 227 aaKnown RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 HMGCS1Q01581 520 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 CD47Q08722 323 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 IFFO1Q0D2I5 559 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 PDIA2Q13087 525 aaKnown RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 DYNC1I2Q13409 638 aaKnown RBP3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 PON2Q15165 354 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 CHRFAM7AQ494W8 412 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 TIMM23BQ5SRD1 257 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 C1orf100Q5SVJ3 147 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 CCNJQ5T5M9 372 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 AWAT2Q6E213 333 aa3.38□□□□□ -1.87
AC055878.1-201ENST00000531858 C2orf66Q6UXQ4 117 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms