RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 LSM6P62312 80 aaKnown RBP13.33□□□□□ -0.28
CPSF1-205ENST00000531042 LCN2P80188 198 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 OTPQ5XKR4 325 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 GLB1L2Q8IW92 636 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 ST7LQ8TDW4 575 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 SLC7A6Q92536 515 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 HAVCR1Q96D42 359 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 SAMD8Q96LT4 415 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 DCLRE1CQ96SD1 692 aaKnown RBP13.33□□□□□ -0.28
CPSF1-205ENST00000531042 SYT4Q9H2B2 425 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 RERGLQ9H628 205 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 C7orf69Q9H7B7 122 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 TMEM106BQ9NUM4 274 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 VSX1Q9NZR4 365 aaPredicted RBP13.33□□□□□ -0.28
CPSF1-205ENST00000531042 NDUFAF4Q9P032 175 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 ASH2LQ9UBL3 628 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 IL20RAQ9UHF4 553 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 OPN4Q9UHM6 478 aa13.33□□□□□ -0.28
CPSF1-205ENST00000531042 FAM32AQ9Y421 112 aaKnown RBP13.33□□□□□ -0.28
CPSF1-205ENST00000531042 OR6C6A6NF89 314 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 TRIM77I1YAP6 450 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 SOCS2O14508 198 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 IMPA2O14732 288 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 SBK2P0C263 348 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 RHCEP18577 417 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 TNFRSF1AP19438 455 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 ZFP36P26651 326 aaKnown RBP13.32□□□□□ -0.28
CPSF1-205ENST00000531042 CFPP27918 469 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 RBMXP38159 391 aaKnown RBP13.32□□□□□ -0.28
CPSF1-205ENST00000531042 FXYD6P3P58550 94 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 PSME3P61289 254 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 CCDC92Q53HC0 331 aaPredicted RBP13.32□□□□□ -0.28
CPSF1-205ENST00000531042 FGD3Q5JSP0 725 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 GLYATQ6IB77 296 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 PTCHD4Q6ZW05 846 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 OR2Z1Q8NG97 314 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 OR1F12Q8NHA8 337 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 FAM216AQ8WUB2 273 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 PTP4A1Q93096 173 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 RSRC1Q96IZ7 334 aaKnown RBP13.32□□□□□ -0.28
CPSF1-205ENST00000531042 C7orf34Q96L11 122 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 COG8Q96MW5 612 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 JMJD8Q96S16 334 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 IL19Q9UHD0 177 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 EGFL7Q9UHF1 273 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 IER3IP1Q9Y5U9 82 aa13.32□□□□□ -0.28
CPSF1-205ENST00000531042 PPIAL4EA0A075B759 164 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 PPIAL4CA0A0B4J2A2 164 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 TRBV4-1A0A0J9YWV2 114 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 PPIAL4DF5H284 164 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 FOXH1O75593 365 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 TXNDC12O95881 172 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 FSHBP01225 129 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 PPIAL4FP0DN26 164 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 CDKN2AP42771 156 aaKnown RBP13.31□□□□□ -0.28
CPSF1-205ENST00000531042 COMPP49747 757 aaPredicted RBP13.31□□□□□ -0.28
CPSF1-205ENST00000531042 ERFP50548 548 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 ACTG1P63261 375 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 SEC23BQ15437 767 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 KCNMB1Q16558 191 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 HSP90B2PQ58FF3 399 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 C1orf94Q6P1W5 598 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 DPY19L2P2Q6ZN68 376 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 ADCK1Q86TW2 530 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 ITLN1Q8WWA0 313 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 CMTM5Q96DZ9 223 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 SLC6A7Q99884 636 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 FUZQ9BT04 418 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 SUCNR1Q9BXA5 334 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 NUAK2Q9H093 628 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 DCAF13Q9NV06 445 aaKnown RBP13.31□□□□□ -0.28
CPSF1-205ENST00000531042 ATPIF1Q9UII2 106 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 AURKCQ9UQB9 309 aa13.31□□□□□ -0.28
CPSF1-205ENST00000531042 TMEM89A2RUT3 159 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 UNC119BA6NIH7 251 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 J3QW42 95 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 RER1O15258 196 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 SURF4O15260 269 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 DIRAS1O95057 198 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 DBHP09172 617 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 RAC2P15153 192 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 RPS6KA3P51812 740 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 TMEM155Q4W5P6 130 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 LRRC28Q86X40 367 aaPredicted RBP13.3□□□□□ -0.28
CPSF1-205ENST00000531042 KLHL36Q8N4N3 616 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 SPICQ8N5J4 248 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 FAM86B1Q8N7N1 296 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 DHRS1Q96LJ7 313 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 SIGLEC11Q96RL6 698 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 GPA33Q99795 319 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 RBM4Q9BWF3 364 aaKnown RBP13.3□□□□□ -0.28
CPSF1-205ENST00000531042 MYLK2Q9H1R3 596 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 PATZ1Q9HBE1 687 aaKnown RBP13.3□□□□□ -0.28
CPSF1-205ENST00000531042 KRCC1Q9NPI7 259 aaPredicted RBP13.3□□□□□ -0.28
CPSF1-205ENST00000531042 MED4Q9NPJ6 270 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 SAMD4AQ9UPU9 718 aaKnown RBP13.3□□□□□ -0.28
CPSF1-205ENST00000531042 PPP1R3CQ9UQK1 317 aa13.3□□□□□ -0.28
CPSF1-205ENST00000531042 POLR3KQ9Y2Y1 108 aaPredicted RBP13.3□□□□□ -0.28
CPSF1-205ENST00000531042 RRP9O43818 475 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms