RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	EMC7	Q9NPA0	242 aa		13.11	□□□□□ -0.31
TM9SF1-209	ENST00000530468	IL20RA	Q9UHF4	553 aa		13.11	□□□□□ -0.31
TM9SF1-209	ENST00000530468	AP3M1	Q9Y2T2	418 aa		13.11	□□□□□ -0.31
TM9SF1-209	ENST00000530468	TEX13C	A0A0J9YWL9	993 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	CD14	P08571	375 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	TROVE2	P10155	538 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	RAC2	P15153	192 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	SEC61A1	P61619	476 aa	Known RBP	13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	KLF10	Q13118	480 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	MEST	Q5EB52	335 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	SLC27A4	Q6P1M0	643 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	ZNF730	Q6ZMV8	503 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	SLC25A28	Q96A46	364 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	ZNF570	Q96NI8	536 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	ATPIF1	Q9UII2	106 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468	STARD10	Q9Y365	291 aa		13.1	□□□□□ -0.31
TM9SF1-209	ENST00000530468		A0A087WUU8	490 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	PRSS37	A4D1T9	235 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	CEACAM18	A8MTB9	384 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	TMEM178B	H3BS89	294 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	CLDN34	H7C241	214 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	RNASE1	P07998	156 aa	Known RBP	13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	PPIAL4G	P0DN37	164 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	FUT4	P22083	530 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	YAP1	P46937	504 aa	Known RBP	13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	MTNR1A	P48039	350 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	RGS6	P49758	472 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	MMP16	P51512	607 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	LSM6	P62312	80 aa	Known RBP	13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	IL13RA1	P78552	427 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	PAX8	Q06710	450 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	HNRNPA0	Q13151	305 aa	Known RBP	13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	ZBED5	Q49AG3	693 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	BTNL3	Q6UXE8	466 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	TMPRSS11F	Q6ZWK6	438 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	MBOAT2	Q6ZWT7	520 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	ZNF48	Q96MX3	618 aa	Predicted RBP	13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	DUX5	Q96PT3	197 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	GCM1	Q9NP62	436 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	RHCG	Q9UBD6	479 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	ADAM18	Q9Y3Q7	739 aa		13.09	□□□□□ -0.31
TM9SF1-209	ENST00000530468	ARHGAP32	A7KAX9	2087 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	LOC100653049	A0A140TA62	436 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	OR6C6	A6NF89	314 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	POM121C	A8CG34	1229 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468		J3KTA2	159 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	FFAR1	O14842	300 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	KRT34	O76011	436 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	WNT2	P09544	360 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	CTLA4	P16410	223 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	GPR4	P46093	362 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	LRRN1	Q6UXK5	716 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	FBXW12	Q6X9E4	464 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	C9orf139	Q6ZV77	190 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	RRM2B	Q7LG56	351 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	FAM122B	Q7Z309	247 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	ARPIN	Q7Z6K5	226 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	VTCN1	Q7Z7D3	282 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	BCL6B	Q8N143	479 aa	Predicted RBP	13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	ATG16L2	Q8NAA4	619 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	OR52E2	Q8NGJ4	325 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	OR5L1	Q8NGL2	311 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	OR1F12	Q8NHA8	337 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	RASD2	Q96D21	266 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468		Q96M85	177 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	C1orf147	Q96MC9	270 aa	Predicted RBP	13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	ANKRD19P	Q9H560	264 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	VIPAS39	Q9H9C1	493 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	UNKL	Q9H9P5	680 aa	Known RBP	13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	SAR1A	Q9NR31	198 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	TMEM5	Q9Y2B1	443 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	SNX13	Q9Y5W8	968 aa		13.08	□□□□□ -0.32
TM9SF1-209	ENST00000530468	CDC42EP2	O14613	210 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	KCNAB3	O43448	404 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	KHDRBS3	O75525	346 aa	Known RBP	13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	FSTL3	O95633	263 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	SDHA	P31040	664 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	RBMX	P38159	391 aa	Known RBP	13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	SRP9	P49458	86 aa	Known RBP	13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	KRR1	Q13601	381 aa	Known RBP	13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	IFI44L	Q53G44	452 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	GPR139	Q6DWJ6	353 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	C1orf94	Q6P1W5	598 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	HDX	Q7Z353	690 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	GLB1L2	Q8IW92	636 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	OR5AS1	Q8N127	324 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	PARP8	Q8N3A8	854 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	OR8G5	Q8NG78	346 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	OR13G1	Q8NGZ3	307 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	PLEKHA8	Q96JA3	519 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	MEGF10	Q96KG7	1140 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	C1QTNF5	Q9BXJ0	243 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	ASH2L	Q9UBL3	628 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	MIOX	Q9UGB7	285 aa		13.07	□□□□□ -0.32
TM9SF1-209	ENST00000530468	SLC16A7	O60669	478 aa		13.06	□□□□□ -0.32
TM9SF1-209	ENST00000530468	NDUFB2	O95178	105 aa		13.06	□□□□□ -0.32
TM9SF1-209	ENST00000530468	ZNF682	O95780	498 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 400.5 ms