RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 BHLHE23Q8NDY6 225 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 OR1J2Q8NGS2 313 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 OR6K3Q8NGY3 331 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 TMPRSS5Q9H3S3 457 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 PTRH2Q9Y3E5 179 aaKnown RBP6.98□□□□□ -1.29
CTNND1-223ENST00000529986 TRAV36DV7A0A075B6V5 113 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 TMEM202A6NGA9 273 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 AVPR2P30518 371 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 RPL29P47914 159 aaKnown RBP6.98□□□□□ -1.29
CTNND1-223ENST00000529986 RAB13P51153 203 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 RAB1AP62820 205 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 C9orf152Q5JTZ5 239 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 ZNF787Q6DD87 383 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 FAM24BQ8N5W8 94 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 NKAIN3Q8N8D7 197 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 SLC24A4Q8NFF2 622 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 OR5B3Q8NH48 314 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 TMEM37Q8WXS4 190 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 LHX4Q969G2 390 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 SEH1LQ96EE3 360 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 EMC6Q9BV81 110 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 GPR173Q9NS66 373 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 ADAM29Q9UKF5 820 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 FAM96BQ9Y3D0 163 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 MARF1Q9Y4F3 1742 aaKnown RBP6.98□□□□□ -1.29
CTNND1-223ENST00000529986 IGHV3-64DA0A0J9YX35 117 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 M0R082 166 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 HMGN4O00479 90 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 PLPP1O14494 284 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 LRP3O75074 770 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 NPPBP16860 134 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 MEOX2P50222 304 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 PMP22Q01453 160 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 INSL4Q14641 139 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 HNRNPA1L2Q32P51 320 aaKnown RBP6.98□□□□□ -1.29
CTNND1-223ENST00000529986 ZNF468Q5VIY5 522 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-223ENST00000529986 ABHD17BQ5VST6 288 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 MFSD12Q6NUT3 480 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 TOMM20LQ6UXN7 152 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 PHYHIPQ92561 330 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 DUS3LQ96G46 650 aaKnown RBP6.98□□□□□ -1.29
CTNND1-223ENST00000529986 SLC6A18Q96N87 628 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 NRSN2Q9GZP1 204 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 CSNK1G1Q9HCP0 422 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 CHRNA9Q9UGM1 479 aa6.98□□□□□ -1.29
CTNND1-223ENST00000529986 ING1Q9UK53 422 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-223ENST00000529986 MYH14Q7Z406 1995 aaKnown RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 A0A1B0GTL3 188 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 IFITM5A6NNB3 132 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 CD63P08962 238 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 METTL15P1P0C7V9 234 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 RAB35Q15286 201 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 DUSP5Q16690 384 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 XAF1Q6GPH4 301 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SLC38A6Q8IZM9 456 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 OR51E1Q8TCB6 317 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 TSLPQ969D9 159 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 TCTN2Q96GX1 697 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 LINC00052Q96N35 136 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 C8orf33Q9H7E9 229 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SCPEP1Q9HB40 452 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 CA14Q9ULX7 337 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 PPP1R3CQ9UQK1 317 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 TNRC6CQ9HCJ0 1690 aaKnown RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 PLSCR5A0PG75 271 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 BTBD17A6NE02 478 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SOX15O60248 233 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 CLPPQ16740 277 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 ST3GAL2Q16842 350 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 AFMIDQ63HM1 303 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 OR4N2Q8NGD1 307 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 UBL7Q96S82 380 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 MED18Q9BUE0 208 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 TRAF4Q9BUZ4 470 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 ZDHHC11Q9H8X9 412 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 IL23AQ9NPF7 189 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 MCTS1Q9ULC4 181 aaKnown RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 KIAA1551Q9HCM1 1747 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 RREB1Q92766 1687 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SERTM2A0A1B0GWG4 89 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 A0A1W2PNV4 684 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 GPR31O00270 319 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 MRPL33O75394 65 aaKnown RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 BCL6P41182 706 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 UBE2G2P60604 165 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 PCBD1P61457 104 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SEMA3BQ13214 749 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 ENDOGQ14249 297 aaKnown RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 TRMT12Q53H54 448 aaKnown RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 NCR3LG1Q68D85 454 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 ISG20Q96AZ6 181 aaKnown RBP6.97□□□□□ -1.29
CTNND1-223ENST00000529986 CSF3RQ99062 836 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SLC46A2Q9BY10 475 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SLC22A13Q9Y226 551 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 GLI3P10071 1580 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 TCRBV16S1A1N1A0A5B0 115 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 SNRPGP15A8MWD9 76 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 FXYD1O00168 92 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 ZNF250P15622 560 aa6.97□□□□□ -1.29
CTNND1-223ENST00000529986 PMCHP20382 165 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms