RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ITLN1Q8WWA0 313 aa18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 SLC7A6Q92536 515 aa18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 RASD2Q96D21 266 aa18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 HAVCR1Q96D42 359 aa18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 FAM46AQ96IP4 442 aaKnown RBP18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 EFCAB1Q9HAE3 211 aa18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 NTN4Q9HB63 628 aa18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 COA3Q9Y2R0 106 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 TANC2Q9HCD6 1990 aa18.89■□□□□ 0.61
TRAPPC4-208ENST00000527680 KHDRBS3O75525 346 aaKnown RBP18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 NDUFB2O95178 105 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 KITLGP21583 273 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 GUCY1A3Q02108 690 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 KRR1Q13601 381 aaKnown RBP18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 Q6ZR03 302 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 LRRC28Q86X40 367 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 GLB1L2Q8IW92 636 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 OR5AS1Q8N127 324 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 ZMYND19Q96E35 227 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 SYT4Q9H2B2 425 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 PATZ1Q9HBE1 687 aaKnown RBP18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 MMP26Q9NRE1 261 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 ASH2LQ9UBL3 628 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 IL19Q9UHD0 177 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 POLR1DQ9Y2S0 133 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 PPIAL4AQ9Y536 164 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 ENPP4Q9Y6X5 453 aa18.88■□□□□ 0.61
TRAPPC4-208ENST00000527680 PPIAL4EA0A075B759 164 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 PPIAL4CA0A0B4J2A2 164 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 PPIAL4DF5H284 164 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 NME4O00746 187 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 SOCS2O14508 198 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 SPRY1O43609 319 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 PPIAL4FP0DN26 164 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 NCK1P16333 377 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 ZNF26P17031 533 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 GSK3BP49841 420 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 BTG1P62324 171 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 ARMCX4Q5H9R4 360 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 FGD3Q5JSP0 725 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 GPR139Q6DWJ6 353 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 FAM122BQ7Z309 247 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 ZNF283Q8N7M2 679 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 ZDHHC22Q8N966 263 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 FAM156AQ8NDB6 213 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 OR5L1Q8NGL2 311 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 OR1F12Q8NHA8 337 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 SLC7A13Q8TCU3 470 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 KCTD14Q9BQ13 255 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 ANKRD19PQ9H560 264 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 ESM1Q9NQ30 184 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 IL20RAQ9UHF4 553 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 AURKCQ9UQB9 309 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 IER3IP1Q9Y5U9 82 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 AUP1Q9Y679 476 aa18.87■□□□□ 0.61
TRAPPC4-208ENST00000527680 CCDC22O60826 627 aa18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 H1F0P07305 194 aaKnown RBP18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 SDHAP31040 664 aa18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 SLC6A9P48067 706 aa18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 LSM6P62312 80 aaKnown RBP18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 TMEM155Q4W5P6 130 aa18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 POP5Q969H6 163 aaKnown RBP18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 OR2V2Q96R30 315 aa18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 RPS6KA6Q9UK32 745 aa18.86■□□□□ 0.61
TRAPPC4-208ENST00000527680 TRAPPC2LH3BP13 241 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 NDUFAB1O14561 156 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 PTP4A3O75365 173 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 RAC2P15153 192 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 ZNF154Q13106 437 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 HLXQ14774 488 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 ZMYND11Q15326 602 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 ESCO2Q56NI9 601 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 SLC27A4Q6P1M0 643 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 SGMS2Q8NHU3 365 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 MRI1Q9BV20 369 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 NUAK2Q9H093 628 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 KRCC1Q9NPI7 259 aaPredicted RBP18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 NRIP3Q9NQ35 241 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 PTTG3PQ9NZH4 202 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 NUP50Q9UKX7 468 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 SIGLEC7Q9Y286 467 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 TENM1Q9UKZ4 2725 aa18.85■□□□□ 0.61
TRAPPC4-208ENST00000527680 RER1O15258 196 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 DBHP09172 617 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 MDH2P40926 338 aaKnown RBP18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 RGS6P49758 472 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 ERFP50548 548 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 NUDT2P50583 147 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 RPS6KA3P51812 740 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 SEC61A1P61619 476 aaKnown RBP18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 UBA52P62987 128 aaKnown RBP18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 KRT72Q14CN4 511 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 CCDC92Q53HC0 331 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 OR2T2Q6IF00 324 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 SIGLECL1Q8N7X8 197 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 DEFB108BQ8NET1 73 aa18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 DVL3Q92997 716 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 ZNF582Q96NG8 517 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC4-208ENST00000527680 GPA33Q99795 319 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms