RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ADCK2Q7Z695 626 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 COMMD2Q86X83 199 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TMEM192Q8IY95 271 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 CMTM4Q8IZR5 234 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ARL14EPQ8N8R7 260 aaPredicted RBP5.25□□□□□ -1.57
CD44-225ENST00000527326 ACOT4Q8N9L9 421 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 RNF149Q8NC42 400 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 LINC00116Q8NCU8 138 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 OR4C5Q8NGB2 326 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ABHD4Q8TB40 342 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 LGALS14Q8TCE9 139 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 GPR148Q8TDV2 347 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SH3RF2Q8TEC5 729 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 HASPINQ8TF76 798 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 Q8WTZ3 238 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 PPP1R1CQ8WVI7 109 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SMPDL3AQ92484 453 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TMEM159Q96B96 161 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 CTHRC1Q96CG8 243 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 RPUSD4Q96CM3 377 aaKnown RBP5.25□□□□□ -1.57
CD44-225ENST00000527326 ZBTB45Q96K62 511 aaPredicted RBP5.25□□□□□ -1.57
CD44-225ENST00000527326 TMEM56Q96MV1 263 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SLC35A5Q9BS91 424 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ELOVL1Q9BW60 279 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 LGR4Q9BXB1 951 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 RAB33BQ9H082 229 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TMEM38AQ9H6F2 299 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 IPPKQ9H8X2 491 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 PLSCR4Q9NRQ2 329 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 LYRM2Q9NU23 88 aaPredicted RBP5.25□□□□□ -1.57
CD44-225ENST00000527326 SLC2A8Q9NY64 477 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 IKZF2Q9UKS7 526 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 SNX10Q9Y5X0 201 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 ETV7Q9Y603 341 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 TMEM56-RWDD3S4R434 201 aa5.25□□□□□ -1.57
CD44-225ENST00000527326 A0A0B4J2A0 478 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 IGHV2-70DA0A0C4DH43 119 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 A0A1W2PQ45 241 aaPredicted RBP5.24□□□□□ -1.57
CD44-225ENST00000527326 A0A1W2PQU0 124 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 A0A1W2PQY0 241 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 TMEM150BA6NC51 233 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 RNF212BA8MTL3 300 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 SERPINE3A8MV23 424 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 J3KTA2 159 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 K7EPK0 472 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 GPR39O43194 453 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 DNAJB6O75190 326 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 GCM2O75603 506 aaPredicted RBP5.24□□□□□ -1.57
CD44-225ENST00000527326 TNFSF13O75888 250 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 KAT7O95251 611 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 CPSF4O95639 269 aaKnown RBP5.24□□□□□ -1.57
CD44-225ENST00000527326 PCCBP05166 539 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 CD1AP06126 327 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 CXCL1P09341 107 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 OR4A8P0C604 315 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 GIMD1P0DJR0 217 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 TMEM225BP0DP42 221 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 LIPCP11150 499 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 FGF5P12034 268 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 LYL1P12980 280 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 PGAM2P15259 253 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 SRMP19623 302 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 CR2P20023 1033 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 SDHBP21912 280 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 BMP5P22003 454 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 CXCR1P25024 350 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 ELAVL4P26378 380 aaKnown RBP5.24□□□□□ -1.57
CD44-225ENST00000527326 HTR1FP30939 366 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 DCTDP32321 178 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 ACAA2P42765 397 aaKnown RBP5.24□□□□□ -1.57
CD44-225ENST00000527326 ALDH3B1P43353 468 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 SLC11A1P49279 550 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 PDLIM4P50479 330 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 DGKEP52429 567 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 POLR2HP52434 150 aaKnown RBP5.24□□□□□ -1.57
CD44-225ENST00000527326 ATP1B3P54709 279 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 SCAND1P57086 179 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 IL2P60568 153 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 RAC3P60763 192 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 UBE2MP61081 183 aaKnown RBP5.24□□□□□ -1.57
CD44-225ENST00000527326 UBE2KP61086 200 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 HBA1P69905 142 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 PRDX4Q13162 271 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 INSL4Q14641 139 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 SLC9A3R2Q15599 337 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 SOWAHAQ2M3V2 549 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 SMIM21Q3B7S5 101 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 ZNF791Q3KP31 576 aaPredicted RBP5.24□□□□□ -1.57
CD44-225ENST00000527326 MORN2Q502X0 79 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 OCIAD2Q56VL3 154 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 ENTPD8Q5MY95 495 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 ZNF585AQ6P3V2 769 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 CNKSR3Q6P9H4 555 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 PODNL1Q6PEZ8 512 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 Q6ZRG5 221 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 TMPPEQ6ZT21 453 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 CATSPERDQ86XM0 798 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 IZUMO1Q8IYV9 350 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 LYG1Q8N1E2 194 aa5.24□□□□□ -1.57
CD44-225ENST00000527326 GBGT1Q8N5D6 347 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms