RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PLEKHS1Q5SXH7 462 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 HENMT1Q5T8I9 393 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SAMD13Q5VXD3 122 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 GGNBP1Q5YKI7 109 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 REEP3Q6NUK4 255 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 DRAM2Q6UX65 266 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 LINGO4Q6UY18 593 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 B3GLCTQ6Y288 498 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM91Q6ZNR0 172 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 C18orf65Q6ZTR6 163 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TRMT1LQ7Z2T5 733 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM144Q7Z5S9 345 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 VTCN1Q7Z7D3 282 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 PIP4P1Q86T03 277 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 FAM58AQ8N1B3 248 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MIER2Q8N344 545 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 C17orf78Q8N4C9 275 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 KCNRGQ8N5I3 272 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ZBTB2Q8N680 514 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CYB561A3Q8NBI2 242 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 RELL2Q8NC24 303 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR4F15Q8NGB8 312 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR4K5Q8NGD3 323 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR51S1Q8NGJ8 323 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR4D5Q8NGN0 318 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR1L6Q8NGR2 347 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 RPLP0P6Q8NHW5 317 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ARRDC2Q8TBH0 407 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 STT3BQ8TCJ2 826 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CASTOR1Q8WTX7 329 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ASB5Q8WWX0 329 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ASB17Q8WXJ9 295 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR8D1Q8WZ84 308 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SPSB4Q96A44 273 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM159Q96B96 161 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 AKR1E2Q96JD6 320 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC41A2Q96JW4 573 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TECTBQ96PL2 329 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR5B2Q96R09 309 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 FCRL5Q96RD9 977 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 HIST1H2BLQ99880 126 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CCDC3Q9BQI4 270 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 C20orf144Q9BQM9 153 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 RHNO1Q9BSD3 238 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CACNG6Q9BXT2 260 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 GABARAPL3Q9BY60 117 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ULBP1Q9BZM6 244 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 OR2J1Q9GZK6 312 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF350Q9GZX5 532 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 LAT2Q9GZY6 243 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC25A31Q9H0C2 315 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MAGT1Q9H0U3 335 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 PORCNQ9H237 461 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SLCO5A1Q9H2Y9 848 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SRMSQ9H3Y6 488 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CST9LQ9H4G1 147 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 DHX35Q9H5Z1 703 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CXorf36Q9H7Y0 433 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 RHOFQ9HBH0 211 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM27Q9HBJ8 222 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 WFDC1Q9HC57 220 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 HHATLQ9HCP6 504 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 Q9N2J8 555 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 EXOSC4Q9NPD3 245 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SIRT3Q9NTG7 399 aaPredicted RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CUTCQ9NTM9 273 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ASF1BQ9NVP2 202 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MRPL22Q9NWU5 206 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 NDUFB11Q9NX14 153 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CNIH4Q9P003 139 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CCDC167Q9P0B6 97 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 MDFICQ9P1T7 246 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 C5AR2Q9P296 337 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 UPB1Q9UBR1 384 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 CACFD1Q9UGQ2 172 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC13A4Q9UKG4 626 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 NIP7Q9Y221 180 aaKnown RBP eCLIP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 EXOSC1Q9Y3B2 195 aaKnown RBP3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF337Q9Y3M9 751 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 TTC3P53804 2025 aa3.31□□□□□ -1.88
CLNS1A-209ENST00000527299 PDCD11Q14690 1871 aaKnown RBP3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 ARID2Q68CP9 1835 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 ALS2Q96Q42 1657 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 A0A087WZY1 265 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 KANTRA0A1W2PQU2 76 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 C7orf77A4D0Y5 90 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 NAP1L6A6NFF2 107 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 OR5H14A6NHG9 310 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 OR6C76A6NM76 312 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 HAS3O00219 553 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 MANBAO00462 879 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 PEX12O00623 359 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 GNGT2O14610 69 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 PRRG1O14668 218 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 LDB2O43679 373 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 TLX2O43763 284 aaPredicted RBP3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 TPST2O60704 377 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 HIST1H2BKO60814 126 aa3.3□□□□□ -1.88
CLNS1A-209ENST00000527299 EEDO75530 441 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms