RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 DEPDC4Q8N2C3 294 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 SLC30A7Q8NEW0 376 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 GJC3Q8NFK1 279 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 OR1F12Q8NHA8 337 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 CNIH3Q8TBE1 160 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 NANOS1Q8WY41 292 aaKnown RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 NRGNQ92686 78 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 INTS14Q96SY0 518 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 RHNO1Q9BSD3 238 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 ESRP2Q9H6T0 727 aaKnown RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 AMBNQ9NP70 447 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 CCNB1IP1Q9NPC3 277 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 NGBQ9NPG2 151 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 DDX28Q9NUL7 540 aaKnown RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 WARS2Q9UGM6 360 aaKnown RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 EXOGQ9Y2C4 368 aaKnown RBP9.3□□□□□ -0.92
NEDD8-205ENST00000527046 DCHS2Q6V1P9 2916 aa9.3□□□□□ -0.92
NEDD8-205ENST00000527046 FLNBO75369 2602 aaKnown RBP9.29□□□□□ -0.92
NEDD8-205ENST00000527046 TMEM129A0AVI4 362 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 SLC22A31A6NKX4 558 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 RAB36O95755 333 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 CD8AP01732 235 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 CD3EP07766 207 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 SPARCP09486 303 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 DANCRP0C864 163 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF823P16415 610 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 NR4A1P22736 598 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 VHLP40337 213 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 GUCA1AP43080 201 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-205ENST00000527046 NUDT6P53370 316 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 NR1H2P55055 460 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 CDH11P55287 796 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 ERVS71-1P61550 626 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 MVKQ03426 396 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF85Q03923 595 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 SCRN3Q0VDG4 424 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 TMED1Q13445 227 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 RAB35Q15286 201 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 MEDAGQ5VYS4 303 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 TMEM154Q6P9G4 183 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 TMEM108Q6UXF1 575 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF704Q6ZNC4 412 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-205ENST00000527046 SHFQ7M4L6 423 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF555Q8NEP9 628 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 OR4F15Q8NGB8 312 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 OR6N2Q8NGY6 317 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 RNF133Q8WVZ7 376 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 LGALS12Q96DT0 336 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 SLAMF6Q96DU3 332 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 COQ7Q99807 217 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 PRRG3Q9BZD7 231 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 YIPF3Q9GZM5 350 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 KCNN2Q9H2S1 579 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 POFUT1Q9H488 388 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 IMPAD1Q9NX62 359 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 PLEK2Q9NYT0 353 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF319Q9P2F9 582 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 MYRFQ9Y2G1 1151 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 RNF115Q9Y4L5 304 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 HSPE1-MOB4S4R3N1 261 aa9.29□□□□□ -0.92
NEDD8-205ENST00000527046 CELSR2Q9HCU4 2923 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 GPRIN2O60269 458 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 MPZL2O60487 215 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 DOK2O60496 412 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 SRSF10O75494 262 aaKnown RBP9.28□□□□□ -0.92
NEDD8-205ENST00000527046 ACSM4P0C7M7 580 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 DBTP11182 482 aaKnown RBP9.28□□□□□ -0.92
NEDD8-205ENST00000527046 MYF6P23409 242 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 SSTR2P30874 369 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 HOXC12P31275 282 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 OPRL1P41146 370 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 RPS7P62081 194 aaKnown RBP9.28□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF91Q05481 1191 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 DOC2BQ14184 412 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 EIF2B1Q14232 305 aaKnown RBP9.28□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF672Q499Z4 452 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-205ENST00000527046 RHOUQ7L0Q8 258 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 GID4Q8IVV7 300 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 NUP37Q8NFH4 326 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 IL17RDQ8NFM7 739 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 OR10H5Q8NGA6 315 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 OR51G2Q8NGK0 314 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 TMEM171Q8WVE6 324 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 AKAP1Q92667 903 aaKnown RBP eCLIP9.28□□□□□ -0.922e-7■■□□□ 11.6
NEDD8-205ENST00000527046 GGHQ92820 318 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 APOL4Q9BPW4 351 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 CDADC1Q9BWV3 514 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 ANKRD60Q9BZ19 345 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 CLEC4MQ9H2X3 399 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-205ENST00000527046 C1orf198Q9H425 327 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 MOV10Q9HCE1 1003 aaKnown RBP9.28□□□□□ -0.92
NEDD8-205ENST00000527046 SLCO1C1Q9NYB5 712 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 UBAP1Q9NZ09 502 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 H2AFY2Q9P0M6 372 aaPredicted RBP9.28□□□□□ -0.92
NEDD8-205ENST00000527046 ATPIF1Q9UII2 106 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 FBXL3Q9UKT7 428 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 PLCE1Q9P212 2302 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 CRYBG3Q68DQ2 2970 aa9.28□□□□□ -0.92
NEDD8-205ENST00000527046 IQCMA0A1B0GVH7 501 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms