RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 ASB10Q8WXI3 467 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 ZDHHC16Q969W1 377 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 TMIGD2Q96BF3 282 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 CCDC124Q96CT7 223 aaKnown RBP5.54□□□□□ -1.52
CD44-221ENST00000526000 CMBLQ96DG6 245 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 PYURFQ96I23 114 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 MPP4Q96JB8 637 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 C4orf45Q96LM5 186 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 GPA33Q99795 319 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 MRI1Q9BV20 369 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 MRPL13Q9BYD1 178 aaKnown RBP5.54□□□□□ -1.52
CD44-221ENST00000526000 WNT5BQ9H1J7 359 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 ANKRD19PQ9H560 264 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 SIAEQ9HAT2 523 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 PATZ1Q9HBE1 687 aaKnown RBP5.54□□□□□ -1.52
CD44-221ENST00000526000 INIPQ9NRY2 104 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 C20orf141Q9NUB4 165 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 TMEM106BQ9NUM4 274 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 PLEK2Q9NYT0 353 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 POMPQ9Y244 141 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 STARD10Q9Y365 291 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 UGT2A1Q9Y4X1 527 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 INSIG2Q9Y5U4 225 aa5.54□□□□□ -1.52
CD44-221ENST00000526000 TCRBV3S1A0A5B6 114 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 H7C1C5 153 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 HOXA3O43365 443 aaPredicted RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 PIP5K1CO60331 668 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ENTPD5O75356 428 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 KRT36O76013 467 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 OR7A10O76100 309 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 SNAP29O95721 258 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ZNF682O95780 498 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 CYB5R3P00387 301 aaPredicted RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 IGF2P01344 180 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 IGHV2-70P01814 119 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ASAH2BP0C7U1 165 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 RAP2AP10114 183 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 FCGR1AP12314 374 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ZNF12P17014 697 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 RHCEP18577 417 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 GATA3P23771 443 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 RBM34P42696 430 aaKnown RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 MAGEA2P43356 314 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 YAP1P46937 504 aaKnown RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 OR1E2P47887 323 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 SLC6A9P48067 706 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ERFP50548 548 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 CRYBA2P53672 197 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ACTR3P61158 418 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 LCN6P62502 163 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 IL13RA1P78552 427 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 MS4A2Q01362 244 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 PIN1Q13526 163 aaPredicted RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 ZMYND11Q15326 602 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 HIST3H3Q16695 136 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 DEFB112Q30KQ8 113 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 FAM209AQ5JX71 171 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 C1orf146Q5VVC0 180 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ZFP1Q6P2D0 407 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 C16orf87Q6PH81 154 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 SLC25A47Q6Q0C1 308 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 BRD3OSQ6XYD6 125 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 Q6ZR03 302 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 LRRC28Q86X40 367 aaPredicted RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 KLHL36Q8N4N3 616 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 LINC00471Q8N535 108 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 FAM156AQ8NDB6 213 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 C19orf18Q8NEA5 215 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 NOXO1Q8NFA2 376 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 TMEM255BQ8WV15 326 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 SLC7A6Q92536 515 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 SLC25A28Q96A46 364 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 NABP1Q96AH0 204 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 SGTBQ96EQ0 304 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 DUS3LQ96G46 650 aaKnown RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 TPD52L3Q96J77 140 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 HSH2DQ96JZ2 352 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 PRRC1Q96M27 445 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 DIRC2Q96SL1 478 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 PRSS27Q9BQR3 290 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 SLC19A3Q9BZV2 496 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 OR2H1Q9GZK4 316 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 C1orf198Q9H425 327 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 RERGLQ9H628 205 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 MARCH7Q9H992 704 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 EMC7Q9NPA0 242 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 IL1RAPQ9NPH3 570 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 PDP1Q9P0J1 537 aaPredicted RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 KLHL21Q9UJP4 597 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ZNF229Q9UJW7 825 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 SH3GLB1Q9Y371 365 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 FAM32AQ9Y421 112 aaKnown RBP5.53□□□□□ -1.52
CD44-221ENST00000526000 TIMM10BQ9Y5J6 103 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 ENPP4Q9Y6X5 453 aa5.53□□□□□ -1.52
CD44-221ENST00000526000 TRAV40A0A0B4J280 105 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 TCRBV5S2A0A599 114 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 DHRS12A0PJE2 317 aa5.52□□□□□ -1.53
CD44-221ENST00000526000 FAM181BA6NEQ2 426 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms