RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CRISP2P16562 243 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 CSNK1DP48730 415 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 FABP6P51161 128 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 ZNF121P58317 390 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 LYZP61626 148 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 YWHAEP62258 255 aaKnown RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 PRR3P79522 188 aaKnown RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 DAZ2Q13117 558 aaKnown RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 SLC39A6Q13433 755 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 VAMP3Q15836 100 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 IL17AQ16552 155 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 C18orf21Q32NC0 220 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 PAGE3Q5JUK9 113 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 TPTE2P1Q5T6R2 138 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 PRMT9Q6P2P2 845 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 DEGS2Q6QHC5 323 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 H2AFVQ71UI9 128 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 ZNF547Q8IVP9 402 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 ST13P4Q8IZP2 240 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 VKORC1L1Q8N0U8 176 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 TRIML2Q8N7C3 387 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 OR52E2Q8NGJ4 325 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 ACER1Q8TDN7 264 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 TFGQ92734 400 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 FAM131CQ96AQ9 280 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 FAM3DQ96BQ1 224 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 RNF185Q96GF1 192 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 SLC35E1Q96K37 410 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 CALN1Q9BXU9 219 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 RAB1BQ9H0U4 201 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 MRM3Q9HC36 420 aaKnown RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 CSNK1G1Q9HCP0 422 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 DAZ3Q9NR90 486 aaKnown RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 IFNKQ9P0W0 207 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 ZNF629Q9UEG4 869 aaPredicted RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 TP53TG3Q9ULZ0 132 aa3.16□□□□□ -1.9
CSDE1-211ENST00000525970 RBMX2Q9Y388 322 aaKnown RBP3.16□□□□□ -1.9
CSDE1-211ENST00000525970 AK9Q5TCS8 1911 aa3.15□□□□□ -1.9
CSDE1-211ENST00000525970 JCADQ9P266 1359 aa3.15□□□□□ -1.9
CSDE1-211ENST00000525970 CENPXA8MT69 81 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 HSBP1L1C9JCN9 74 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 XKRYO14609 159 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 TRAF3IP2O43734 574 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-211ENST00000525970 MPDU1O75352 247 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 LCA5LO95447 670 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 HPRT1P00492 218 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 BGLAPP02818 100 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 CATP04040 527 aaKnown RBP3.15□□□□□ -1.91
CSDE1-211ENST00000525970 GNAO1P09471 354 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 CALM1P0DP23 149 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 CALM2P0DP24 149 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 CALM3P0DP25 149 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 GABRG2P18507 467 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 CD9P21926 228 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 USF1P22415 310 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-211ENST00000525970 ZNF138P52744 262 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 TAS2R39P59534 338 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 PSMC5P62195 406 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 ZNF630Q2M218 657 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-211ENST00000525970 TMEM255AQ5JRV8 349 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 COA6Q5JTJ3 125 aaKnown RBP3.15□□□□□ -1.91
CSDE1-211ENST00000525970 C6orf183Q5T699 404 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 OTPQ5XKR4 325 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 ZNF621Q6ZSS3 439 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 PID1Q7Z2X4 250 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 HORMAD1Q86X24 394 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 C11orf42Q8N5U0 333 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 SUMF2Q8NBJ7 301 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 NOXO1Q8NFA2 376 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 MCOLN3Q8TDD5 553 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 ASZ1Q8WWH4 475 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 TMEM230Q96A57 120 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 WFIKKN1Q96NZ8 548 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 MICU1Q9BPX6 476 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 LZTS2Q9BRK4 669 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 CHRNA10Q9GZZ6 450 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 UBE2ZQ9H832 354 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-211ENST00000525970 SLCO1B3Q9NPD5 702 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 ZNF302Q9NR11 478 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 MMP26Q9NRE1 261 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 ABCB10Q9NRK6 738 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 MCUBQ9NWR8 336 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 SLC25A37Q9NYZ2 338 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 STMN3Q9NZ72 180 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 TRAPPC4Q9Y296 219 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 SCN2AQ99250 2005 aa3.15□□□□□ -1.91
CSDE1-211ENST00000525970 NISCHQ9Y2I1 1504 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 GJE1A6NN92 205 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 POLR3GO15318 223 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-211ENST00000525970 ENTPD5O75356 428 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 IGLV2-23P01705 113 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 GFAPP14136 432 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 ZNF30P17039 623 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 GGT1P19440 569 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 F2RP25116 425 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 MAS1LP35410 378 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 RBMXP38159 391 aaKnown RBP3.14□□□□□ -1.91
CSDE1-211ENST00000525970 GNB2P62879 340 aa3.14□□□□□ -1.91
CSDE1-211ENST00000525970 ORC2Q13416 577 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-211ENST00000525970 ZSCAN26Q16670 478 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms