RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 IL10P22301 178 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 CD82P27701 267 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 PTPN6P29350 595 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 CMPK1P30085 196 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 RPA3P35244 121 aaPredicted RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 XCR1P46094 333 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 SERPINB9P50453 376 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 ETV1P50549 477 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 BLVRAP53004 296 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 AP1S2P56377 157 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 ATP6V0D1P61421 351 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 CXCL6P80162 114 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 IGLV3-21P80748 117 aaPredicted RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 ARHGAP19Q14CB8 494 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 TSNQ15631 228 aaKnown RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 C18orf21Q32NC0 220 aaPredicted RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 PAGE2BQ5JRK9 111 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 METTL11BQ5VVY1 283 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 AGTRAPQ6RW13 159 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 BTNL3Q6UXE8 466 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 FRA10AC1Q70Z53 315 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 VASH2Q86V25 355 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 SPATA24Q86W54 205 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 PAQR7Q86WK9 346 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 PRR22Q8IZ63 422 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 CENPLQ8N0S6 344 aaPredicted RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 ZNF525Q8N782 197 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 FBXO30Q8TB52 745 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 MRAPQ8TCY5 172 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 MCOLN3Q8TDD5 553 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 AENQ8WTP8 325 aaKnown RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 KCTD4Q8WVF5 259 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 GTSF1Q8WW33 167 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 FGF11Q92914 225 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 MED8Q96G25 268 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 SAMD8Q96LT4 415 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 OR4K3Q96R72 315 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 DERL2Q9GZP9 239 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 CHRNA10Q9GZZ6 450 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 SPNS1Q9H2V7 528 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 FANCEQ9HB96 536 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 PARVBQ9HBI1 364 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 FAM60AQ9NP50 221 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 MRPS30Q9NP92 439 aaKnown RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 NGBQ9NPG2 151 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 MIEF1Q9NQG6 463 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 EXOSC3Q9NQT5 275 aaKnown RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 FBXO8Q9NRD0 319 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 STARD5Q9NSY2 213 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 EURLQ9NYK6 297 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 ANKMY1Q9P2S6 941 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 PSMC3IPQ9P2W1 217 aaPredicted RBP2.88□□□□□ -1.95
CD44-219ENST00000525685 SH3BGRL2Q9UJC5 107 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 OARD1Q9Y530 152 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 ASXL3Q9C0F0 2248 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 CABIN1Q9Y6J0 2220 aa2.88□□□□□ -1.95
CD44-219ENST00000525685 SDK2Q58EX2 2172 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 CEP250Q9BV73 2442 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 FRYLO94915 3013 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 IQANK1A0A1B0GTG1 560 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 FAM168BA1KXE4 195 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SMIM23A6NLE4 172 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ANKRD30BLA7E2S9 258 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 WASHC1A8K0Z3 465 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SUPT3HB4E1H0 165 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 E7EQ34 232 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 H0YL77 283 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 UBXN8O00124 270 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 TAPBPO15533 448 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 RRP8O43159 456 aaKnown RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 SUPT3HO75486 399 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SCRG1O75711 98 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 OR2B3O76000 313 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 KLHL2O95198 593 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ANP32DO95626 131 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 STATHP02808 62 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ANXA5P08758 320 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 CT45A10P0DMU9 189 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ZBTB25P24278 435 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 CRABP2P29373 138 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 RORAP35398 523 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SLC26A3P40879 764 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SLCO1A2P46721 670 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 POU3F4P49335 361 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 REEP5Q00765 189 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 PRDX1Q06830 199 aaKnown RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 ZP4Q12836 540 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 EXOSC2Q13868 293 aaKnown RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 TGFBIQ15582 683 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 FBXO48Q5FWF7 155 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 SLC22A10Q63ZE4 541 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 FRMPD2BQ6IN97 320 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ZNF562Q6V9R5 426 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 VN1R4Q7Z5H5 301 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 THOC6Q86W42 341 aaKnown RBP2.87□□□□□ -1.95
CD44-219ENST00000525685 MISPQ8IVT2 679 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 CCDC36Q8IYA8 594 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 ZNF619Q8N2I2 560 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 TCAIMQ8N3R3 496 aa2.87□□□□□ -1.95
CD44-219ENST00000525685 MREGQ8N565 214 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms