RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 MKRN2OSH3BPM6 223 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 TEX46H3BTG2 121 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 SLC33A1O00400 549 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 ZBTB5O15062 677 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CFLARO15519 480 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 B4GALT5O43286 388 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ZNF780AO75290 641 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 CSO75390 466 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 VPS26AO75436 327 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ZMPSTE24O75844 475 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ANXA4P09525 319 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 NPIPA8P0DM63 369 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 FOSL2P15408 326 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ZNF30P17039 623 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 IMPDH1P20839 514 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 TBXA2RP21731 343 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 HLA-DMAP28067 261 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 PRDX6P30041 224 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CA5AP35218 305 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 UGT1A3P35503 534 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 UGT1A5P35504 534 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CYLC1P35663 651 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 FDFT1P37268 417 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 MAGEA6P43360 314 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 SRP9P49458 86 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 RPL14P50914 215 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 PRKXP51817 358 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 PLA2G16P53816 162 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 MLF1P58340 268 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 DNAJB13P59910 316 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 RPL27P61353 136 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 RPS15P62841 145 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 IGLV3-21P80748 117 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 IL9RQ01113 521 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 IL18R1Q13478 541 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 GPNMBQ14956 572 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 MPPED2Q15777 294 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CHI3L2Q15782 390 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 PSG3Q16557 428 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 GUK1Q16774 197 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 IMPG1Q17R60 797 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 MICBQ29980 383 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 BSXQ3C1V8 233 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 C14orf28Q4W4Y0 310 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 SPANXN2Q5MJ10 180 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 DNLZQ5SXM8 178 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 C9orf64Q5T6V5 341 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 SYT6Q5T7P8 510 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 WDR25Q64LD2 544 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 REP15Q6BDI9 236 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CAPN13Q6MZZ7 669 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 CGB2Q6NT52 195 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ATRAIDQ6UW56 229 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 WDR88Q6ZMY6 472 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 LUZP2Q86TE4 346 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 RBM45Q8IUH3 476 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 WDFY1Q8IWB7 410 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 KLHL7Q8IXQ5 586 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 C4orf19Q8IY42 314 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 BOD1L2Q8IYS8 172 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 RDH10Q8IZV5 341 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ZFP82Q8N141 532 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 SLC35F6Q8N357 371 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 PARP8Q8N3A8 854 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 C9orf62Q8N4C0 152 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 C17orf78Q8N4C9 275 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CCDC54Q8NEL0 328 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 OR1M1Q8NGA1 313 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 OR56B1Q8NGI3 324 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 OR4K15Q8NH41 348 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 TRMT10AQ8TBZ6 339 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 GPX8Q8TED1 209 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CDS1Q92903 461 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 HGDQ93099 445 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 PSMG2Q969U7 264 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 TM4SF18Q96CE8 201 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 DTD2Q96FN9 168 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 C16orf58Q96GQ5 468 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 TSSK3Q96PN8 268 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 SLC38A2Q96QD8 506 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 CHP1Q99653 195 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ECSITQ9BQ95 431 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 SLC30A2Q9BRI3 323 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 C7orf50Q9BRJ6 194 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 TMEM208Q9BTX3 173 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 DDA1Q9BW61 102 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 NEUROG2Q9H2A3 272 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 SLC38A1Q9H2H9 487 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ANKRD19PQ9H560 264 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 TMEM185BQ9H7F4 350 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 GEMIN7Q9H840 131 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 ZNF430Q9H8G1 570 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 NMNAT1Q9HAN9 279 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 ABCB9Q9NP78 766 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 YAE1D1Q9NRH1 226 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 PLSCR3Q9NRY6 295 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 BFARQ9NZS9 450 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 GCNT4Q9P109 453 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 DHCR7Q9UBM7 475 aaKnown RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 RSL24D1Q9UHA3 163 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms