RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 ZFP36L2P47974 494 aaKnown RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 RASSF2P50749 326 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 SSR4P51571 173 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 RIDAP52758 137 aaKnown RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 STC1P52823 247 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 CLDN12P56749 244 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 RPL8P62917 257 aaKnown RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 LTBQ06643 244 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 UNC119Q13432 240 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 KRR1Q13601 381 aaKnown RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 GGTLC2Q14390 218 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 ZNF268Q14587 947 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 SMCO1Q147U7 214 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 KIR2DS1Q14954 304 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 CD226Q15762 336 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 NDUFA5Q16718 116 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 VMACQ2NL98 169 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 FAM153CQ494X1 144 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 FAM106AQ4KMX7 169 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 VWA2Q5GFL6 755 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OR10J3Q5JRS4 329 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 TEX30Q5JUR7 227 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 CPTPQ5TA50 214 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OR8G2PQ6IF36 304 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 TYW3Q6IPR3 259 aaKnown RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 PWWP2BQ6NUJ5 590 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 MED27Q6P2C8 311 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 CCNI2Q6ZMN8 369 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 Q6ZSV7 163 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 CREB3L2Q70SY1 520 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 BHLHA9Q7RTU4 235 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 MRGPREQ86SM8 312 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 LHFPL3Q86UP9 236 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 BPIFB2Q8N4F0 458 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 ZNF740Q8NDX6 193 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 DUSP18Q8NEJ0 188 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 SEMA6DQ8NFY4 1073 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OR1M1Q8NGA1 313 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OR51D1Q8NGF3 324 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OR11L1Q8NGX0 322 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OR5B3Q8NH48 314 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 OR10J5Q8NHC4 309 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 FAM45AQ8TCE6 357 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 MCOLN3Q8TDD5 553 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 TMEM174Q8WUU8 243 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 MRPS31Q92665 395 aaKnown RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 SMIM19Q96E16 107 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 C20orf173Q96LM9 149 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 HOPXQ9BPY8 73 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 TMEM109Q9BVC6 243 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 DDA1Q9BW61 102 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 DSN1Q9H410 356 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 TMEM38AQ9H6F2 299 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 UBE2ZQ9H832 354 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 RDH14Q9HBH5 336 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 TMEM27Q9HBJ8 222 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 SPANXB1Q9NS25 103 aaPredicted RBP3.8□□□□□ -1.8
CD44-213ENST00000525209 IL17CQ9P0M4 197 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 IL36RNQ9UBH0 155 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 MUTYHQ9UIF7 546 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 COPS3Q9UNS2 423 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 HS3ST3B1Q9Y662 390 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 NRAPQ86VF7 1730 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 TOPAZ1Q8N9V7 1692 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 RREB1Q92766 1687 aa3.8□□□□□ -1.8
CD44-213ENST00000525209 RGPD5Q99666 1765 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 ROCK2O75116 1388 aaKnown RBP3.79□□□□□ -1.8
CD44-213ENST00000525209 CNTNAP1P78357 1384 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 ABCC11Q96J66 1382 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 MROH7Q68CQ1 1323 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 IGHV4-28A0A0C4DH34 117 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 CENPVL1A0A0U1RR11 272 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.79□□□□□ -1.8
CD44-213ENST00000525209 A0A1B0GV72 72 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 A0A1B0GW55 424 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.79□□□□□ -1.8
CD44-213ENST00000525209 F5H5T6 163 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 CDC7O00311 574 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 CXCR6O00574 342 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 CCL21O00585 134 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 MRPS12O15235 138 aaKnown RBP3.79□□□□□ -1.8
CD44-213ENST00000525209 CTSVO60911 334 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 EEDO75530 441 aaKnown RBP3.79□□□□□ -1.8
CD44-213ENST00000525209 CDK2AP2O75956 126 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 GAGE7O76087 117 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 ATP6V1G2O95670 118 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 KRT75O95678 551 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 BCHEP06276 602 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 WNT2P09544 360 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 ACSM4P0C7M7 580 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 ZDHHC11BP0C7U3 371 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 DUX4L2P0CJ85 424 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 DUX4L3P0CJ86 424 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 DUX4L4P0CJ87 422 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 DUX4L5P0CJ88 424 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 DUX4L6P0CJ89 424 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 DUX4L7P0CJ90 424 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 GAGE12FP0CL80 117 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 GAGE12GP0CL81 117 aa3.79□□□□□ -1.8
CD44-213ENST00000525209 GAGE12IP0CL82 117 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms