RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 SLC22A18Q96BI1 424 aa11.83□□□□□ -0.52
CAPN1-202ENST00000524773 GAL3ST4Q96RP7 486 aa11.83□□□□□ -0.52
CAPN1-202ENST00000524773 SEMA6CQ9H3T2 930 aa11.83□□□□□ -0.52
CAPN1-202ENST00000524773 IGFLR1Q9H665 355 aa11.83□□□□□ -0.52
CAPN1-202ENST00000524773 TMEM184BQ9Y519 407 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-202ENST00000524773 HLA-DOBP13765 273 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ACTBP60709 375 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 GPR85P60893 370 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ACTG1P63261 375 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ZP2Q05996 745 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF141Q15928 474 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF528Q3MIS6 628 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 C9orf50Q5SZB4 431 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-202ENST00000524773 TMEM184AQ6ZMB5 413 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF584Q8IVC4 421 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 WDFY1Q8IWB7 410 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 BMFQ96LC9 184 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 OR11A1Q9GZK7 315 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 FANCFQ9NPI8 374 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 COA4Q9NYJ1 87 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ATPIF1Q9UII2 106 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 SLC5A6Q9Y289 635 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 FRYLO94915 3013 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 RENP00797 406 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ASAH2BP0C7U1 165 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 IL11P20809 199 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 AGTR1P30556 359 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 SERPINF1P36955 418 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 FMODQ06828 376 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 SVBPQ8N300 66 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 OR13C3Q8NGS6 347 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 MARCH1Q8TCQ1 289 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 LMF2Q9BU23 707 aaKnown RBP11.82□□□□□ -0.52
CAPN1-202ENST00000524773 PTGES2Q9H7Z7 377 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF629Q9UEG4 869 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-202ENST00000524773 RP1P56715 2156 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 C9orf170A2RU37 121 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 C2orf72A6NCS6 295 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 H0YIZ8 118 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 P2RY10O00398 339 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 CD8AP01732 235 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 PDZK1IP1Q13113 114 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 ELOCQ15369 112 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 NKAPLQ5M9Q1 402 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 EEF1A1P5Q5VTE0 462 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 C15orf40Q8WUR7 153 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 PMM1Q92871 262 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 DGAT2Q96PD7 388 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 PIGMQ9H3S5 423 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
CAPN1-202ENST00000524773 CENPMQ9NSP4 180 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 UPB1Q9UBR1 384 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 CTSFQ9UBX1 484 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 LRP12Q9Y561 859 aa11.82□□□□□ -0.52
CAPN1-202ENST00000524773 EFCAB7A8K855 629 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 LINC00587B1AMM8 73 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 HCRTR2O43614 444 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 ZBTB25P24278 435 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 DNASE1L1P49184 302 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 SLC25A1P53007 311 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 RAB38P57729 211 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 SNRPEP62304 92 aaKnown RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 RASGEF1BQ0VAM2 473 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 BIKQ13323 160 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 RNASE10Q5GAN6 216 aaKnown RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 TMEM196Q5HYL7 178 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 CDCP2Q5VXM1 449 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF776Q68DI1 518 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 OR8B4Q96RC9 309 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 NICN1Q9BSH3 213 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 MRI1Q9BV20 369 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 OR8D2Q9GZM6 311 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 EDARQ9UNE0 448 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 MEX3AA1L020 520 aaKnown RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 XKRYO14609 159 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 TNFSF14O43557 240 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 STK17BO94768 372 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 OR2F2O95006 317 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 ADH1BP00325 375 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 RCC1P18754 421 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 FCARP24071 287 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 GNALP38405 381 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 INSM1Q01101 510 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 OR2F1Q13607 317 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 ACKR1Q16570 336 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 WBP2NLQ6ICG8 309 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 CLEC9AQ6UXN8 241 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 RAB11FIP2Q7L804 512 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 SLC43A2Q8N370 569 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 ZSCAN4Q8NAM6 433 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 TMEM229BQ8NBD8 167 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 METTL21AQ8WXB1 218 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 MAFIPQ8WZ33 124 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 ABHD6Q9BV23 337 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 FOXQ1Q9C009 403 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 NXF5Q9H1B4 397 aaKnown RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 COA3Q9Y2R0 106 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-202ENST00000524773 NUP210LQ5VU65 1888 aa11.81□□□□□ -0.52
CAPN1-202ENST00000524773 MED19A0JLT2 244 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms