RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 HLA-DPB1P04440 258 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 ASAH2BP0C7U1 165 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 OPN1MW2P0DN77 364 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 OPN1MW3P0DN78 364 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 IRF2P14316 349 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 FUT1P19526 365 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 GUCA1AP43080 201 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-211ENST00000523441 IER3P46695 156 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 GUCY1A3Q02108 690 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 LAPTM4AQ15012 233 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 NSUN5P1Q3KNT7 163 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
SDCBP-211ENST00000523441 METTL11BQ5VVY1 283 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 SFRP4Q6FHJ7 346 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-211ENST00000523441 ZNF613Q6PF04 617 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 SLC25A47Q6Q0C1 308 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 CCBE1Q6UXH8 406 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-211ENST00000523441 LINC00114Q6XXX2 140 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 IGFN1Q86VF2 1251 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 TSPYL5Q86VY4 417 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-211ENST00000523441 SLC30A8Q8IWU4 369 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 ZSCAN4Q8NAM6 433 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-211ENST00000523441 NPEPL1Q8NDH3 523 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 WDFY2Q96P53 400 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 PPA2Q9H2U2 334 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 CENPHQ9H3R5 247 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 WDR76Q9H967 626 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 SLC25A37Q9NYZ2 338 aa9.64□□□□□ -0.87
SDCBP-211ENST00000523441 COL7A1Q02388 2944 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 ELOVL7A1L3X0 281 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 BTBD17A6NE02 478 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 H7C1C5 153 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 BIRC5O15392 142 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 LYPD3O95274 346 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 SCG5P05408 212 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 CST2P09228 141 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 KITLGP21583 273 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 PMELP40967 661 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 SRP9P49458 86 aaKnown RBP9.63□□□□□ -0.87
SDCBP-211ENST00000523441 BPIFB3P59826 476 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 PCBD1P61457 104 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 LCN6P62502 163 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 KPRPQ5T749 579 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-211ENST00000523441 ZBTB37Q5TC79 503 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 FAM27BQ5VT28 67 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 PRAMEF6Q5VXH4 476 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 SLC35E4Q6ICL7 350 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 C1orf122Q6ZSJ8 110 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 MSRB3Q8IXL7 192 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 ANKRD42Q8N9B4 389 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 OR4D11Q8NGI4 311 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 MAGEB18Q96M61 343 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 DPAGT1Q9H3H5 408 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 RERGLQ9H628 205 aa9.63□□□□□ -0.87
SDCBP-211ENST00000523441 MEPEQ9NQ76 525 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-211ENST00000523441 NDRG4Q9ULP0 352 aaKnown RBP9.63□□□□□ -0.87
SDCBP-211ENST00000523441 TRAPPC13A5PLN9 417 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 TRPC5OSA6NMA1 111 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 PHYHO14832 338 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 UBDO15205 165 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 HDAC3O15379 428 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 SHOX2O60902 331 aaPredicted RBP9.62□□□□□ -0.87
SDCBP-211ENST00000523441 BMP2P12643 396 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 DLX1P56177 255 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 RPL15P61313 204 aaKnown RBP9.62□□□□□ -0.87
SDCBP-211ENST00000523441 POU4F2Q12837 409 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 ENDOGQ14249 297 aaKnown RBP9.62□□□□□ -0.87
SDCBP-211ENST00000523441 DUSP7Q16829 419 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 ARMC4Q5T2S8 1044 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 ZNF841Q6ZN19 808 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 DCDC5Q6ZRR9 648 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 HDDC2Q7Z4H3 204 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.62□□□□□ -0.87
SDCBP-211ENST00000523441 PTOV1Q86YD1 416 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 MICU2Q8IYU8 434 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 C1orf87Q8N0U7 546 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 HAVCR1Q96D42 359 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 RBP7Q96R05 134 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 OR52B2Q96RD2 323 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 IKZF5Q9H5V7 419 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 ZIM2Q9NZV7 527 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 ERVK-18Q9QC07 812 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 CTSZQ9UBR2 303 aa9.62□□□□□ -0.87
SDCBP-211ENST00000523441 C12orf71A8MTZ7 269 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 IFNL4K9M1U5 179 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 MLNRO43193 412 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 ADAM20O43506 726 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 OR7A10O76100 309 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 DBHP09172 617 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 VSIG10L2P0DP72 767 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 MMP9P14780 707 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 CD247P20963 164 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 FUT4P22083 530 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 GABRA5P31644 462 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 HERPUD1Q15011 391 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 OR8B8Q15620 311 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 LY6EQ16553 131 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 KRT71Q3SY84 523 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 DEFB121Q5J5C9 76 aa9.61□□□□□ -0.87
SDCBP-211ENST00000523441 MSANTD1Q6ZTZ1 278 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms