RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 GUCA1BQ9UMX6 200 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 ACOT9Q9Y305 439 aa3.28□□□□□ -1.88
SKP1-209ENST00000522552 COL11A2P13942 1736 aaPredicted RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 SLC5A10A0PJK1 596 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 C9J4A7 227 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TMEM238C9JI98 176 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 K7EQD1 137 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CDIPTO14735 213 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CDC40O60508 579 aaKnown RBP eCLIP3.27□□□□□ -1.89
SKP1-209ENST00000522552 ICOSLGO75144 302 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 NXPH4O95158 308 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ATP6V1G2O95670 118 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ASS1P00966 412 aaKnown RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 KLK3P07288 261 aaPredicted RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 OR8U9P0C7N5 309 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 LIMS3P0CW19 117 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 LIMS4P0CW20 117 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 FOLR1P15328 257 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 HIST1H1CP16403 213 aaKnown RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 SHMT2P34897 504 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 OR1D4P47884 311 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CAV2P51636 162 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CLDN12P56749 244 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TAS2R39P59534 338 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CCL7P80098 99 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 STX4Q12846 297 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 KIAA0141Q14154 515 aaPredicted RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 TFDP2Q14188 446 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TMED2Q15363 201 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 PARP15Q460N3 678 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 MUC21Q5SSG8 566 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 SYPL2Q5VXT5 272 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 LPCAT4Q643R3 524 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 IGFL4Q6B9Z1 124 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 RWDD4Q6NW29 188 aaKnown RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 RBMS3Q6XE24 437 aaKnown RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 PTF1AQ7RTS3 328 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CARM1Q86X55 608 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 NANOGP1Q8N7R0 232 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CCNYL1Q8N7R7 359 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 OR8U1Q8NH10 309 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ARPC1AQ92747 370 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 NABP1Q96AH0 204 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TMA16Q96EY4 203 aaKnown RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 NMUR2Q9GZQ4 415 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 OR51J1Q9H342 316 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 DSN1Q9H410 356 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ZDHHC4Q9NPG8 344 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 FGFR1OP2Q9NVK5 253 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ZNF256Q9Y2P7 627 aaPredicted RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 KLF12Q9Y4X4 402 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 USH1CQ9Y6N9 552 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 V9GYQ6 96 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ZFYVE9O95405 1425 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TTC3P53804 2025 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 RALGAPA1Q6GYQ0 2036 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 KIAA0232Q92628 1395 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CACNA1FO60840 1977 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TRABD2BA6NFA1 517 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 E9PLD3 99 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 F6UB75 175 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 GABRPO00591 440 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 RAD51CO43502 376 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 EIF3GO75821 320 aaKnown RBP eCLIP3.27□□□□□ -1.89
SKP1-209ENST00000522552 SNAP29O95721 258 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 PTTG1O95997 202 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 LALBAP00709 142 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 HLA-AP01891 365 aaKnown RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 CALM1P0DP23 149 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CALM2P0DP24 149 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CALM3P0DP25 149 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 KIR2DS4P43632 304 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 UBE2E1P51965 193 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TAS2R31P59538 309 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ERVK-16P61578 105 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ALX1Q15699 326 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TPTE2P1Q5T6R2 138 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 FAM27D1Q5T7N8 215 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 SPOPLQ6IQ16 392 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 MED27Q6P2C8 311 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 EPGNQ6UW88 154 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 CREB3L2Q70SY1 520 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TMEM150AQ86TG1 271 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 HOGA1Q86XE5 327 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 C10orf67Q8IYJ2 551 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 BLIDQ8IZY5 108 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 FTMTQ8N4E7 242 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 ATPAF2Q8N5M1 289 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 TBC1D19Q8N5T2 526 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 DOK4Q8TEW6 326 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 RNF138Q8WVD3 245 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 MED8Q96G25 268 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 UBE2E2Q96LR5 201 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 C9orf85Q96MD7 179 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 GPR22Q99680 433 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 GABRG3Q99928 467 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 NXF2Q9GZY0 626 aaKnown RBP3.27□□□□□ -1.89
SKP1-209ENST00000522552 METTL9Q9H1A3 318 aa3.27□□□□□ -1.89
SKP1-209ENST00000522552 REEP1Q9H902 201 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms