RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ENPP1P22413 925 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 RAG2P55895 527 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 CARD18P57730 90 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 AADACL3Q5VUY0 350 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 OR1M1Q8NGA1 313 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 OR2G2Q8NGZ5 317 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 CPNE4Q96A23 557 aaPredicted RBP12.55□□□□□ -0.4
SYNPO-205ENST00000522122 MRGPRX1Q96LB2 322 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 ABHD6Q9BV23 337 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 OR11A1Q9GZK7 315 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 PHF1O43189 567 aaPredicted RBP12.55□□□□□ -0.4
SYNPO-205ENST00000522122 GMDSO60547 372 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 LILRB5O75023 590 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 HBE1P02100 147 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF133P52736 654 aaPredicted RBP12.55□□□□□ -0.4
SYNPO-205ENST00000522122 INSL4Q14641 139 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 MLF2Q15773 248 aaPredicted RBP12.55□□□□□ -0.4
SYNPO-205ENST00000522122 VWA2Q5GFL6 755 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF813Q6ZN06 617 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 FJX1Q86VR8 437 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 TMEM200AQ86VY9 491 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 LGI3Q8N145 548 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 SLAMF6Q96DU3 332 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 SIGLEC11Q96RL6 698 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 NOSIPQ9Y314 301 aaKnown RBP12.55□□□□□ -0.4
SYNPO-205ENST00000522122 PCDHGA5Q9Y5G8 931 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 DSPPQ9NZW4 1301 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 H0YIG0 161 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 PLPP2O43688 288 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 CER1O95813 267 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 IGHA1P01876 353 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 FKBP2P26885 142 aaKnown RBP12.55□□□□□ -0.4
SYNPO-205ENST00000522122 SLC6A1P30531 599 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 EMDP50402 254 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 FAM53BQ14153 422 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 KCNAB1Q14722 419 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 TTC9Q92623 222 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 GCM1Q9NP62 436 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 OBP2BQ9NPH6 170 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 B3GALT5Q9Y2C3 310 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 OR6C65A6NJZ3 312 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 STMND1H3BQB6 276 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 SGCEO43556 437 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 CBX7O95931 251 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 C3orf49Q96BT1 292 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 ORAI1Q96D31 301 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 TRAPPC2LQ9UL33 140 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 EXO1Q9UQ84 846 aaKnown RBP12.55□□□□□ -0.4
SYNPO-205ENST00000522122 SLC22A13Q9Y226 551 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 PATJQ8NI35 1801 aa12.55□□□□□ -0.4
SYNPO-205ENST00000522122 A0A0U1RQK1 487 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 PRSS37A4D1T9 235 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 SERPINA7P05543 415 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 DCTDP32321 178 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 TAS2R30P59541 319 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF266Q14584 549 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 SLC17A1Q14916 467 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 TMEM196Q5HYL7 178 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 CORO6Q6QEF8 472 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF793Q6ZN11 406 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 OR2AK2Q8NG84 335 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 ABHD5Q8WTS1 349 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 LIPHQ8WWY8 451 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 TRMT61AQ96FX7 289 aaKnown RBP12.54□□□□□ -0.4
SYNPO-205ENST00000522122 OR14J1Q9UGF5 321 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 PIGLQ9Y2B2 252 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 SEC16AO15027 2179 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 D6RAR5 112 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 PRKNO60260 465 aaPredicted RBP12.54□□□□□ -0.4
SYNPO-205ENST00000522122 IGHEP01854 428 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 CD3DP04234 171 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 UBE2MP61081 183 aaKnown RBP12.54□□□□□ -0.4
SYNPO-205ENST00000522122 DBPQ10586 325 aaPredicted RBP12.54□□□□□ -0.4
SYNPO-205ENST00000522122 CLINT1Q14677 625 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 ZNF362Q5T0B9 420 aaPredicted RBP12.54□□□□□ -0.4
SYNPO-205ENST00000522122 SLC30A7Q8NEW0 376 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 OR51E1Q8TCB6 317 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 NT5CQ8TCD5 201 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 ST7LQ8TDW4 575 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 RNF32Q9H0A6 362 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 A8MXE2 369 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 RGS11O94810 467 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 CATR1Q13166 79 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 PXDC1Q5TGL8 231 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 ACOT7LQ6ZUV0 252 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 TMPRSS11FQ6ZWK6 438 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 C9orf62Q8N4C0 152 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 TSLPQ969D9 159 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 KLK11Q9UBX7 282 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 KCNG2Q9UJ96 466 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 ANKRD36A6QL64 1941 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 OR5H14A6NHG9 310 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 IDSB3KWA1 339 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 HSPB6O14558 160 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 MZT1Q08AG7 82 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 SNTB1Q13884 538 aaKnown RBP12.54□□□□□ -0.4
SYNPO-205ENST00000522122 TXNIPQ9H3M7 391 aa12.54□□□□□ -0.4
SYNPO-205ENST00000522122 EXOSC3Q9NQT5 275 aaKnown RBP12.54□□□□□ -0.4
SYNPO-205ENST00000522122 TAS2R5Q9NYW4 299 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms