RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PATE4P0C8F1 98 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 FMO3P31513 532 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 KLF3P57682 345 aaPredicted RBP8.11□□□□□ -1.11
CLK4-209ENST00000521621 GABPB1Q06547 395 aaPredicted RBP8.11□□□□□ -1.11
CLK4-209ENST00000521621 CRMP1Q14194 572 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 GINS1Q14691 196 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 MSMPQ1L6U9 139 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 CLEC12BQ2HXU8 276 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 WFDC11Q8NEX6 87 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 OR5L1Q8NGL2 311 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 C10orf105Q8TEF2 133 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 APOBEC3DQ96AK3 386 aaPredicted RBP8.11□□□□□ -1.11
CLK4-209ENST00000521621 EMC7Q9NPA0 242 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 ASH2LQ9UBL3 628 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 IL20RAQ9UHF4 553 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 TMEFF2Q9UIK5 374 aaPredicted RBP8.11□□□□□ -1.11
CLK4-209ENST00000521621 ITGB1BP2Q9UKP3 347 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 LOC390937A0A1W2PQ73 354 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 APOC1P02654 83 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 RAC2P15153 192 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 SELEP16581 610 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 DCTDP32321 178 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 PDLIM4P50479 330 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 ZNF786Q8N393 782 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 ZNF540Q8NDQ6 660 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 PTP4A1Q93096 173 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 HAVCR1Q96D42 359 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 PERPQ96FX8 193 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 SRA1Q9HD15 236 aaKnown RBP8.11□□□□□ -1.11
CLK4-209ENST00000521621 ZDHHC8Q9ULC8 765 aa8.11□□□□□ -1.11
CLK4-209ENST00000521621 C5orf49A4QMS7 147 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 IFNL4K9M1U5 179 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 M0R233 179 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 GPRIN2O60269 458 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 MT-ND5P03915 603 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 ZNF823P16415 610 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 MMP15P51511 669 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 PPP1CBP62140 327 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 GRB2P62993 217 aaKnown RBP8.1□□□□□ -1.11
CLK4-209ENST00000521621 CDK5R2Q13319 367 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 RSPO1Q2MKA7 263 aaPredicted RBP8.1□□□□□ -1.11
CLK4-209ENST00000521621 CLEC12AQ5QGZ9 265 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 KRT80Q6KB66 452 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 ACSM5Q6NUN0 579 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 DEGS2Q6QHC5 323 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 DRAM2Q6UX65 266 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 TIGD4Q8IY51 512 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 ATG16L2Q8NAA4 619 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 OR2AJ1Q8NGZ0 328 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 AKR7LQ8NHP1 331 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 ST7LQ8TDW4 575 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 TRUB1Q8WWH5 349 aaKnown RBP8.1□□□□□ -1.11
CLK4-209ENST00000521621 HPS1Q92902 700 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 GDF2Q9UK05 429 aaPredicted RBP8.1□□□□□ -1.11
CLK4-209ENST00000521621 COMMD3-BMI1R4GMX3 469 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 TANC2Q9HCD6 1990 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 PRR23D1E9PI22 279 aaPredicted RBP8.1□□□□□ -1.11
CLK4-209ENST00000521621 H3BN98 237 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 ACSM4P0C7M7 580 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 PRR23D2P0DMB1 279 aaPredicted RBP8.1□□□□□ -1.11
CLK4-209ENST00000521621 CDKN1AP38936 164 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 HTR5AP47898 357 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 LCN1P1Q5VSP4 162 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 PROKR2Q8NFJ6 384 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 OR1J1Q8NGS3 322 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 LRTOMTQ8WZ04 291 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 Q96MF0 132 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 RDH12Q96NR8 316 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 TSSK2Q96PF2 358 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 SORCS2Q96PQ0 1159 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 ATF6BQ99941 703 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 YIPF3Q9GZM5 350 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 NIPAL2Q9H841 368 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 KRT84Q9NSB2 600 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 TMEM160Q9NX00 188 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 PLEK2Q9NYT0 353 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 TEX15Q9BXT5 2789 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 C17orf100A8MU93 164 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 MPZL1O95297 269 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 TACSTD2P09758 323 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 GSTT1P30711 240 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 PTGES3Q15185 160 aaKnown RBP8.1□□□□□ -1.11
CLK4-209ENST00000521621 CLEC2AQ6UVW9 174 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 KLF14Q8TD94 323 aaPredicted RBP8.1□□□□□ -1.11
CLK4-209ENST00000521621 RNF133Q8WVZ7 376 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 SPTSSAQ969W0 71 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 SPSB4Q96A44 273 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 MAP6Q96JE9 813 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 KCNJ15Q99712 375 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 RHNO1Q9BSD3 238 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 S100A14Q9HCY8 104 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 KIF17Q9P2E2 1029 aa8.1□□□□□ -1.11
CLK4-209ENST00000521621 MAST4O15021 2626 aa8.09□□□□□ -1.11
CLK4-209ENST00000521621 LRBAP50851 2863 aa8.09□□□□□ -1.11
CLK4-209ENST00000521621 SOX14O95416 240 aa8.09□□□□□ -1.11
CLK4-209ENST00000521621 GCH1P30793 250 aa8.09□□□□□ -1.11
CLK4-209ENST00000521621 PPP1R8Q12972 351 aaKnown RBP8.09□□□□□ -1.11
CLK4-209ENST00000521621 KPNB1Q14974 876 aaKnown RBP8.09□□□□□ -1.11
CLK4-209ENST00000521621 SLC35F1Q5T1Q4 408 aa8.09□□□□□ -1.11
CLK4-209ENST00000521621 NXNL2Q5VZ03 156 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms