RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 KRTAP10-3P60369 221 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 GGTLC2Q14390 218 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 XKR4Q5GH76 650 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 TMEM255AQ5JRV8 349 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 LCN12Q6JVE5 192 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 EIF3MQ7L2H7 374 aaKnown RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 OTUD6AQ7L8S5 288 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 PDIK1LQ8N165 341 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 LIX1Q8N485 282 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR10G9Q8NGN4 311 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR9G4Q8NGQ1 327 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR2G3Q8NGZ4 309 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 RHEBL1Q8TAI7 183 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF75CPQ92670 426 aaPredicted RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 AURKBQ96GD4 344 aaPredicted RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 B3GALT6Q96L58 329 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 PRRC1Q96M27 445 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 WFIKKN1Q96NZ8 548 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 TDRD3Q9H7E2 651 aaKnown RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 C8orf33Q9H7E9 229 aaPredicted RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 LGALS13Q9UHV8 139 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 GNPTGQ9UJJ9 305 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 PRG3Q9Y2Y8 225 aaPredicted RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 SLC25A15Q9Y619 301 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 MROH7-TTC4A0A0A0MT08 1334 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 MROH5Q6ZUA9 1318 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 RAD50Q92878 1312 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 USP42Q9H9J4 1324 aaKnown RBP2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 RFX7Q2KHR2 1363 aa2.32□□□□□ -2.04
HMGN1P28-201ENST00000521340 COL24A1Q17RW2 1714 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 DDX60LQ5H9U9 1706 aaKnown RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 NRAPQ86VF7 1730 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 SLX4Q8IY92 1834 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 ARFGEF1Q9Y6D6 1849 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 MYH10P35580 1976 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 IGLV1-36A0A0B4J1U3 117 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 GLYATL1P3A0A0U1RQE8 302 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 LRRIQ3A6PVS8 624 aaPredicted RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 ERI2A8K979 691 aaKnown RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 SUPT3HB4E1H0 165 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 K7EMT4 169 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 PEX7O00628 323 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 EMC8O43402 210 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 ERLIN2O94905 339 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 IGKV3-15P01624 115 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 POLR2MP0CAP2 368 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 GKN3PP0CG01 181 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 CRISP2P16562 243 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 GTF2E2P29084 291 aaKnown RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 RRM2P31350 389 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 UQCRFS1P47985 274 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 MRPL19P49406 292 aaKnown RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 CAV2P51636 162 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 CCR8P51685 355 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 YWHAGP61981 247 aaKnown RBP eCLIP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 MXD1Q05195 221 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 NSDHLQ15738 373 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 NKAIN1Q4KMZ8 207 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 PPM1LQ5SGD2 360 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 STUMQ69YW2 141 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR52W1Q6IF63 320 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 FRMPD2BQ6IN97 320 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 DUX4L9Q6RFH8 374 aaPredicted RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 LYPD2Q6UXB3 125 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF621Q6ZSS3 439 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZBED8Q8IZ13 594 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 DCUN1D4Q92564 292 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 STMN2Q93045 179 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 UCN3Q969E3 161 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 MARC2Q969Z3 335 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 OPALINQ96PE5 141 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 SH3GL3Q99963 347 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 RASL11BQ9BPW5 248 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR2AG1Q9H205 316 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 SIAEQ9HAT2 523 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 MRPL47Q9HD33 250 aaKnown RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 ST3GAL6Q9Y274 331 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 TRAPPC4Q9Y296 219 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 ADCY9O60503 1353 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 MED23Q9ULK4 1368 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 NPHP4O75161 1426 aaPredicted RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 KCPQ6ZWJ8 1503 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF831Q5JPB2 1677 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 TNRC6CQ9HCJ0 1690 aaKnown RBP2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 TAF1LQ8IZX4 1826 aa2.31□□□□□ -2.04
HMGN1P28-201ENST00000521340 SCN2AQ99250 2005 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 ZNF816-ZNF321PA0A0X1KG74 233 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 PLAC8L1A1L4L8 177 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 LSM1O15116 133 aaKnown RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 AIREO43918 545 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 TACSTD2P09758 323 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 RALBP11234 206 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 SLC2A5P22732 501 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 GABRR1P24046 479 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 OR1E1P30953 314 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 HRH1P35367 487 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 NUDT1P36639 197 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 SERPINB5P36952 375 aa2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 CCT6AP40227 531 aaKnown RBP2.3□□□□□ -2.04
HMGN1P28-201ENST00000521340 PEX19P40855 299 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms