RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 STEAP1BQ6NZ63 245 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 IDO2Q6ZQW0 420 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 Q6ZTK2 550 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 PXKQ7Z7A4 578 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 C1orf210Q8IVY1 113 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 SLC25A43Q8WUT9 341 aaPredicted RBP9.11□□□□□ -0.95
MCF2-209ENST00000520602 SESN1Q9Y6P5 492 aa9.11□□□□□ -0.95
MCF2-209ENST00000520602 GMDSO60547 372 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 TMIGD3P0DMS9 266 aaPredicted RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 GZMKP49863 264 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 SUMO3P55854 103 aaPredicted RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 MFGE8Q08431 387 aaPredicted RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 THEM4Q5T1C6 240 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 DUSP18Q8NEJ0 188 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 OR51T1Q8NGJ9 327 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 SAP25Q8TEE9 199 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 GPX7Q96SL4 187 aaPredicted RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 ST6GALNAC5Q9BVH7 336 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 BANF2Q9H503 90 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 GDF2Q9UK05 429 aaPredicted RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 CDH23Q9H251 3354 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 MPDZO75970 2070 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 TP53BP1Q12888 1972 aaPredicted RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 I3L521 148 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 RER1O15258 196 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 C1QBP02746 253 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 ACHEP22303 614 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 SNU13P55769 128 aaKnown RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 CARD18P57730 90 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 RPS4XP62701 263 aaKnown RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 PMPCAQ10713 525 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 IL11RAQ14626 422 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 RBMS2Q15434 407 aaKnown RBP9.1□□□□□ -0.95
MCF2-209ENST00000520602 FAM122BQ7Z309 247 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 LOXL2Q9Y4K0 774 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 TMEM265A0A087WTH1 108 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 FAM230AA0A1W2PPH8 454 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 GGT3PA6NGU5 568 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 D6RAR5 112 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 ZNF254O75437 659 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 STK17BO94768 372 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 CD3DP04234 171 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 AMY2BP19961 511 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 MST1P26927 711 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 TAS2R19P59542 299 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 FOXK1P85037 733 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 AAED1Q7RTV5 226 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 FGF11Q92914 225 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 NIPAL2Q9H841 368 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 GPR84Q9NQS5 396 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 CLDN16Q9Y5I7 305 aa9.1□□□□□ -0.95
MCF2-209ENST00000520602 SHISA7A6NL88 538 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 EEF1E1-BLOC1S5C9J1V9 151 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 TO15178 435 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 ICAM2P13598 275 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 NAGAP17050 411 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 SERPINA2P20848 420 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 DYRK1AQ13627 763 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 LINC00303Q3SY05 128 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 ADGRE4PQ86SQ3 457 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 TRAPPC6BQ86SZ2 158 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 TMEM17Q86X19 198 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 OR51A2Q8NGJ7 313 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 SPTSSAQ969W0 71 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 FOXRED1Q96CU9 486 aaPredicted RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 OXGR1Q96P68 337 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 MICU1Q9BPX6 476 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 GON7Q9BXV9 100 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 PBOV1Q9GZY1 135 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 CHMP1AQ9HD42 196 aaPredicted RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 FOXJ3Q9UPW0 622 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 HRH3Q9Y5N1 445 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 B3GALT1Q9Y5Z6 326 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 J3QRE1 110 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 TNFSF11O14788 317 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 UPK3AO75631 287 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 SYNGR4O95473 234 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 CX3CR1P49238 355 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 FZD5Q13467 585 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 BEST3Q8N1M1 668 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 SLC22A24Q8N4F4 322 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 APCDD1LQ8NCL9 501 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 LILRB4Q8NHJ6 448 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 CHAC2Q8WUX2 184 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 NECAB3Q96P71 396 aaPredicted RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 PIGQQ9BRB3 760 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 ZNF649Q9BS31 505 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 NMNAT2Q9BZQ4 307 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 METTL8Q9H825 291 aaKnown RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 GPR27Q9NS67 375 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 B4GALT7Q9UBV7 327 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 KIF26BQ2KJY2 2108 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 CACNA1HO95180 2353 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 LIPT2A6NK58 231 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 SLC17A2O00624 439 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 EIF1BO60739 113 aaKnown RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 DXOO77932 396 aaKnown RBP9.09□□□□□ -0.95
MCF2-209ENST00000520602 HTR3BO95264 441 aa9.09□□□□□ -0.95
MCF2-209ENST00000520602 CYB561P49447 251 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms