RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RELL2Q8NC24 303 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ASB5Q8WWX0 329 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 BCL2L2Q92843 193 aaPredicted RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 SPTSSAQ969W0 71 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 PELI1Q96FA3 418 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 MAP6Q96JE9 813 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 OPALINQ96PE5 141 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ATF6BQ99941 703 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 OR2H1Q9GZK4 316 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 NIPAL2Q9H841 368 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ISG20L2Q9H9L3 353 aaKnown RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 OBP2BQ9NPH6 170 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 BATF3Q9NR55 127 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 DDX28Q9NUL7 540 aaKnown RBP7.84□□□□□ -1.15
CSMD1-208ENST00000520561 BABAM2Q9NXR7 383 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 SLCO1C1Q9NYB5 712 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ELOVL5Q9NYP7 299 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ATPIF1Q9UII2 106 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 LRP12Q9Y561 859 aa7.84□□□□□ -1.15
CSMD1-208ENST00000520561 ATRXP46100 2492 aa7.84□□□□□ -1.16
CSMD1-208ENST00000520561 BSNQ9UPA5 3926 aa7.84□□□□□ -1.16
CSMD1-208ENST00000520561 CACNA1BQ00975 2339 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ARPC4-TTLL3A0A0A6YYG9 625 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 IQCMA0A1B0GVH7 501 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 A8MXE2 369 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 CCRL2O00421 344 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 MAGEB4O15481 346 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 HLA-HP01893 362 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 APOC1P02654 83 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 MMP7P09237 267 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 PATE4P0C8F1 98 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 PSMB1P20618 241 aaKnown RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 CHRNB4P30926 498 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 UQCRFS1P47985 274 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 TGM4P49221 684 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ASCL1P50553 236 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 PSMA6P60900 246 aaKnown RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 HIST1H3AP68431 136 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 PLP2Q04941 152 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ECH1Q13011 328 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 CDK5R1Q15078 307 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 GABRA6Q16445 453 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 GSG1Q2KHT4 349 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 CCDC58Q4VC31 144 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 CCDC92Q53HC0 331 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 HIST2H3PS2Q5TEC6 136 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 LIPNQ5VXI9 398 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF774Q6NX45 483 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF474Q6S9Z5 364 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 HIST2H3AQ71DI3 136 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 SATL1Q86VE3 508 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ZGRF1Q86YA3 2104 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ALDH16A1Q8IZ83 802 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF283Q8N7M2 679 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ZFP41Q8N8Y5 198 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF485Q8NCK3 441 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 OR13F1Q8NGS4 319 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 PRR7Q8TB68 274 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 LRRC46Q96FV0 321 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 BBC3Q96PG8 261 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 COQ7Q99807 217 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 HDHD5Q9BXW7 423 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 WNT5BQ9H1J7 359 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 MOB1AQ9H8S9 216 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ELOVL3Q9HB03 270 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 MOV10Q9HCE1 1003 aaKnown RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 PNRC2Q9NPJ4 139 aaKnown RBP7.83□□□□□ -1.16
CSMD1-208ENST00000520561 SLC17A5Q9NRA2 495 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 FBXL3Q9UKT7 428 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 GTF2A1LQ9UNN4 478 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 SLC5A6Q9Y289 635 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 AMDHD2Q9Y303 409 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 GRIP1Q9Y3R0 1128 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 R4GMQ9 66 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 ALPK2Q86TB3 2170 aa7.83□□□□□ -1.16
CSMD1-208ENST00000520561 SPENQ96T58 3664 aaKnown RBP7.82□□□□□ -1.16
CSMD1-208ENST00000520561 PNMA8CA0A1B0GUJ8 204 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 SMIM31A0A1B0GVY4 71 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 OR6C6A6NF89 314 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 CCDC160A6NGH7 325 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 OR5H1A6NKK0 313 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 FAM90A27PA6NNH2 459 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 LOC110117498-PIK3R3F6TDL0 507 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 LRRTM2O43300 516 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 LALBAP00709 142 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 PRB1P04280 392 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 ANXA2P07355 339 aaKnown RBP7.82□□□□□ -1.16
CSMD1-208ENST00000520561 CPEP16870 476 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 PAX7P23759 505 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 DCTDP32321 178 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 PSMB10P40306 273 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 CX3CR1P49238 355 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 RGS6P49758 472 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 GTF2A1P52655 376 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-208ENST00000520561 TPTEP56180 551 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 RAB1AP62820 205 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 TUBA1BP68363 451 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 ADORA2A-AS1P86434 159 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 PSG4Q00888 419 aa7.82□□□□□ -1.16
CSMD1-208ENST00000520561 TSC22D1Q15714 1073 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms