RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 HNRNPA0Q13151 305 aaKnown RBP13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 DGCR6Q14129 220 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 SEC23BQ15437 767 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 TMEM255AQ5JRV8 349 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 LEG1Q6P5S2 330 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 SMARCD3Q6STE5 483 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 FAM122BQ7Z309 247 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 ADCK1Q86TW2 530 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 TEX29Q8N6K0 151 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 ZNF418Q8TF45 676 aaPredicted RBP13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 CMBLQ96DG6 245 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 NSMCE2Q96MF7 247 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 WACQ9BTA9 647 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 IFT27Q9BW83 186 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 NUAK2Q9H093 628 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 DCAF13Q9NV06 445 aaKnown RBP13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 PURGQ9UJV8 347 aaKnown RBP13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 TMCC3Q9ULS5 477 aa13.7□□□□□ -0.22
IGHV3-42-201ENST00000520410 IGHV2-5P01817 119 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 FABP3P05413 133 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 COX5BP10606 129 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 TNFRSF1AP19438 455 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 SLC6A6P31641 620 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 MSX2P35548 267 aaPredicted RBP13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 OMPP47874 163 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 LIMS1P48059 325 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 MEP1BQ16820 701 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 DPY19L2P2Q6ZN68 376 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 PTCHD4Q6ZW05 846 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 TSEN54Q7Z6J9 526 aaKnown RBP13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 ATG16L2Q8NAA4 619 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR1F12Q8NHA8 337 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 PYURFQ96I23 114 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 COG8Q96MW5 612 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 TSSK2Q96PF2 358 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 MYLK2Q9H1R3 596 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 SRA1Q9HD15 236 aaKnown RBP13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 TBCCD1Q9NVR7 557 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 STARD10Q9Y365 291 aa13.69□□□□□ -0.22
IGHV3-42-201ENST00000520410 RER1O15258 196 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 DBHP09172 617 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 ADRA2CP18825 462 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 EPHA1P21709 976 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 CRABP1P29762 137 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 GNGT1P63211 74 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 SPRNQ5BIV9 151 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 ITLN1Q8WWA0 313 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 CDADC1Q9BWV3 514 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR52D1Q9H346 318 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 NPTNQ9Y639 398 aa13.68□□□□□ -0.22
IGHV3-42-201ENST00000520410 CUBNO60494 3623 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 SURF4O15260 269 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 SNX3O60493 162 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 PTP4A3O75365 173 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 UBOX5O94941 541 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 RRM2P31350 389 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 RBMXP38159 391 aaKnown RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 IFNGR2P38484 337 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 CDKN2AP42771 156 aaKnown RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 LSM6P62312 80 aaKnown RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 HLXQ14774 488 aaPredicted RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 SAMD4BQ5PRF9 694 aaKnown RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 CORO6Q6QEF8 472 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 C12orf54Q6X4T0 127 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 BPIFB2Q8N4F0 458 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 KLHL36Q8N4N3 616 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 BHLHE23Q8NDY6 225 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 SDR9C7Q8NEX9 313 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR5L1Q8NGL2 311 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR2AJ1Q8NGZ0 328 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR4K13Q8NH42 304 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 C7orf34Q96L11 122 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 GPX7Q96SL4 187 aaPredicted RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 CDRT15Q96T59 188 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 NMNAT3Q96T66 252 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 FN3KQ9H479 309 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 C7orf69Q9H7B7 122 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 TMEM106BQ9NUM4 274 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 DCAF16Q9NXF7 216 aa13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 VSX1Q9NZR4 365 aaPredicted RBP13.67□□□□□ -0.22
IGHV3-42-201ENST00000520410 IGHV3-64DA0A0J9YX35 117 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR6C6A6NF89 314 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 ARPC2O15144 300 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 DEAF1O75398 565 aaPredicted RBP13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 VENTXO95231 258 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 RGS6P49758 472 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 ERFP50548 548 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 GYS2P54840 703 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 CCDC92Q53HC0 331 aaPredicted RBP13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR2T2Q6IF00 324 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 PGM2L1Q6PCE3 622 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 C16orf89Q6UX73 402 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 LINC00346Q8IVM7 164 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 PGAM4Q8N0Y7 254 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 SPICQ8N5J4 248 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 GJC3Q8NFK1 279 aa13.66□□□□□ -0.22
IGHV3-42-201ENST00000520410 OR10AD1Q8NGE0 317 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms