RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 SLC1A1P43005 524 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 EIF2B2P49770 351 aaKnown RBP5.49□□□□□ -1.53
LSM1-202ENST00000520286 MOGQ16653 247 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 PRR30Q53SZ7 412 aaPredicted RBP5.49□□□□□ -1.53
LSM1-202ENST00000520286 SPANXN2Q5MJ10 180 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 VRK2Q86Y07 508 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 SLC7A5P1Q8MH63 180 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 C4orf33Q8N1A6 199 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 OR10H4Q8NGA5 316 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 OR9A1PQ8NGU1 263 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 ZNF420Q8TAQ5 688 aaPredicted RBP5.49□□□□□ -1.53
LSM1-202ENST00000520286 AGR3Q8TD06 166 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 PYDC1Q8WXC3 89 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 CMTM7Q96FZ5 175 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 C9orf72Q96LT7 481 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 TSNARE1Q96NA8 513 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 TECTBQ96PL2 329 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 THTPAQ9BU02 230 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 MROQ9BYG7 248 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 ILKAPQ9H0C8 392 aaPredicted RBP5.49□□□□□ -1.53
LSM1-202ENST00000520286 PTGES2Q9H7Z7 377 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 TREM2Q9NZC2 230 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 ZNF107Q9UII5 783 aaPredicted RBP5.49□□□□□ -1.53
LSM1-202ENST00000520286 ERGIC3Q9Y282 383 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 RNF11Q9Y3C5 154 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 V9GY05 133 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 PLIN4Q96Q06 1357 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 CDK5RAP2Q96SN8 1893 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 OTOFQ9HC10 1997 aa5.49□□□□□ -1.53
LSM1-202ENST00000520286 DDX60LQ5H9U9 1706 aaKnown RBP5.48□□□□□ -1.53
LSM1-202ENST00000520286 PIEZO1Q92508 2521 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 PRUNE2Q8WUY3 3088 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 SMCO3A2RU48 225 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 H3BNH8 94 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 TXNDC9O14530 226 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 TIMP1P01033 207 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 IGHV3-23P01764 117 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 GIG44P09565 113 aaPredicted RBP5.48□□□□□ -1.53
LSM1-202ENST00000520286 CT62P0C5K7 136 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 CYBAP13498 195 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ANXA8P13928 327 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 DCKP27707 260 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 SLC26A2P50443 739 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 C21orf59P57076 290 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 CTAG1AP78358 180 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 KCNJ8Q15842 424 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 RGS21Q2M5E4 152 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ZBED5Q49AG3 693 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 UTF1Q5T230 341 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 C1orf185Q5T7R7 199 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ANXA8L1Q5VT79 327 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 C11orf71Q6IPW1 123 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ZFP1Q6P2D0 407 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 TTC23LQ6PF05 361 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 BAIAP2L2Q6UXY1 529 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 TFAP2EQ6VUC0 442 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 SLC26A11Q86WA9 606 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 MMAAQ8IVH4 418 aaKnown RBP5.48□□□□□ -1.53
LSM1-202ENST00000520286 GTPBP8Q8N3Z3 284 aaPredicted RBP5.48□□□□□ -1.53
LSM1-202ENST00000520286 LILRB4Q8NHJ6 448 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 TCP10LQ8TDR4 215 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 DCAKDQ8WVC6 231 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ELMO1Q92556 727 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ISOC1Q96CN7 298 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 PANX1Q96RD7 426 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 SELENOIQ9C0D9 397 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ACTR6Q9GZN1 396 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ANKRA2Q9H9E1 313 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 GLRX2Q9NS18 164 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ZNF275Q9NSD4 429 aaPredicted RBP5.48□□□□□ -1.53
LSM1-202ENST00000520286 TMEM9Q9P0T7 183 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 GCNT4Q9P109 453 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 SLC17A7Q9P2U7 560 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 KIAA1257Q9ULG3 409 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 POMPQ9Y244 141 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 RLFQ13129 1914 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 ASTN1O14525 1302 aa5.48□□□□□ -1.53
LSM1-202ENST00000520286 NAV1Q8NEY1 1877 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 EYSQ5T1H1 3165 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 NSG1A0A0A6YYJ2 146 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 CENPBD1B2RD01 187 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 PSMD12O00232 456 aaPredicted RBP5.47□□□□□ -1.53
LSM1-202ENST00000520286 CNMDO75829 334 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 H6PDO95479 791 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 C1orf105O95561 183 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 FTH1P02794 183 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 TFPTP0C1Z6 253 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 GZMAP12544 262 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 ABOP16442 354 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 IFNA8P32881 189 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 IFITM2Q01629 132 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 TLE4Q04727 773 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 EGFEM1PQ0D2K5 195 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 CYTH1Q15438 398 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 MARCH8Q5T0T0 291 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 C6orf183Q5T699 404 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 TIGD3Q6B0B8 471 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 Q6ZN92 141 aa5.47□□□□□ -1.53
LSM1-202ENST00000520286 HSD17B13Q7Z5P4 300 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms