RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 GUCA1AP43080 201 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-215ENST00000519474 ARHGDIBP52566 201 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 SMIM11AP58511 58 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 VBP1P61758 197 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 RPS23P62266 143 aaKnown RBP7.99□□□□□ -1.13
HDAC3-215ENST00000519474 RFX4Q33E94 735 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 ALKBH6Q3KRA9 238 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 SPATS1Q496A3 300 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 TMEM255AQ5JRV8 349 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 OTPQ5XKR4 325 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 GPR139Q6DWJ6 353 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 ZNF774Q6NX45 483 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 C11orf88Q6PI97 169 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 C16orf89Q6UX73 402 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 DPY19L2P2Q6ZN68 376 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 PTCHD4Q6ZW05 846 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 SYT9Q86SS6 491 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 ALDH16A1Q8IZ83 802 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 ZNF101Q8IZC7 436 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 OR1J1Q8NGS3 322 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 YIPF5Q969M3 257 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 RASD2Q96D21 266 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 MARS2Q96GW9 593 aaKnown RBP7.99□□□□□ -1.13
HDAC3-215ENST00000519474 NSMCE2Q96MF7 247 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 GPX7Q96SL4 187 aaPredicted RBP7.99□□□□□ -1.13
HDAC3-215ENST00000519474 MDFIQ99750 246 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 CIB1Q99828 191 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 EMC7Q9NPA0 242 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 POLE4Q9NR33 117 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 MAGEL2Q9UJ55 1249 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 AURKCQ9UQB9 309 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 V9GYQ6 96 aa7.99□□□□□ -1.13
HDAC3-215ENST00000519474 TEX13CA0A0J9YWL9 993 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 A0A1W2PPL8 197 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 C17orf100A8MU93 164 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 J3KRW8 73 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 DCTN6O00399 190 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 ST8SIA5O15466 376 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 SLC16A7O60669 478 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 KHDRBS3O75525 346 aaKnown RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 NCR1O76036 304 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 ERCC1P07992 297 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 COX5BP10606 129 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 APEHP13798 732 aaKnown RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 CTLA4P16410 223 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 MSR1P21757 451 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 SDHAP31040 664 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 IL2RGP31785 369 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 MPV17P39210 176 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 MAGEB1P43366 347 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 GSSP48637 474 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 HSPA13P48723 471 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 GZMKP49863 264 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 GDI2P50395 445 aaKnown RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 TMEM33P57088 247 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 SELENOVP59797 346 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 PCBD1P61457 104 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 POLR2GP62487 172 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 DBPQ10586 325 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 TRIP10Q15642 601 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 ZNF718Q3SXZ3 478 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 C1orf94Q6P1W5 598 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 ZDHHC21Q8IVQ6 265 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 SLC25A40Q8TBP6 338 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 RDH5Q92781 318 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 C1orf159Q96HA4 380 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 C4orf45Q96LM5 186 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 ZNF570Q96NI8 536 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 TSSK2Q96PF2 358 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 DDOQ99489 341 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 WACQ9BTA9 647 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 YIPF3Q9GZM5 350 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 NUAK2Q9H093 628 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 RACGAP1Q9H0H5 632 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 SRA1Q9HD15 236 aaKnown RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 HINT3Q9NQE9 182 aaKnown RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 TMEM160Q9NX00 188 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 SLCO1C1Q9NYB5 712 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 VSX1Q9NZR4 365 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 ACTR3BQ9P1U1 418 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 EIF3KQ9UBQ5 218 aaKnown RBP7.98□□□□□ -1.13
HDAC3-215ENST00000519474 B9D1Q9UPM9 204 aa7.98□□□□□ -1.13
HDAC3-215ENST00000519474 ABCA2Q9BZC7 2435 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 LOC100289279A0A1B0GTE1 492 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 TCRBV5S2A0A599 114 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 C12orf71A8MTZ7 269 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 L7N2F9 121 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 SOCS2O14508 198 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 XKRYO14609 159 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 WNT9BO14905 357 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 ARPC3O15145 178 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 GPANK1O95872 356 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 FAM107AO95990 144 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 TGFAP01135 160 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 GASTP01350 101 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 FABP3P05413 133 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 RRM2P31350 389 aa7.97□□□□□ -1.13
HDAC3-215ENST00000519474 KLF3P57682 345 aaPredicted RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 LSM6P62312 80 aaKnown RBP7.97□□□□□ -1.13
HDAC3-215ENST00000519474 CCL8P80075 99 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms