RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 KLF14Q8TD94 323 aaPredicted RBP11.37□□□□□ -0.59
VEGFA-219ENST00000518824 UBASH3BQ8TF42 649 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 NEU4Q8WWR8 484 aaPredicted RBP11.37□□□□□ -0.59
VEGFA-219ENST00000518824 SNX18Q96RF0 628 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 SOX7Q9BT81 388 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 BCL2L14Q9BZR8 327 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 RACGAP1Q9H0H5 632 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 LRMDAQ9H2I8 198 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 NTN4Q9HB63 628 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 TBC1D23Q9NUY8 699 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 PLEK2Q9NYT0 353 aa11.37□□□□□ -0.59
VEGFA-219ENST00000518824 ABCA2Q9BZC7 2435 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 LRP5LA4QPB2 252 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 IDH3BO43837 385 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 TIPRLO75663 272 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 SLC25A16P16260 332 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 IL2RGP31785 369 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 GGT2P36268 569 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 TEKQ02763 1124 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 LOXL1Q08397 574 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-219ENST00000518824 SCRN3Q0VDG4 424 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 CRMP1Q14194 572 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 NKPD1Q17RQ9 610 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 SLC36A3Q495N2 470 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 TMEM154Q6P9G4 183 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 LNX2Q8N448 690 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 OR52L1Q8NGH7 329 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 OR1F12Q8NHA8 337 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 HCAR1Q9BXC0 346 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 MED20Q9H944 212 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 PDP1Q9P0J1 537 aaPredicted RBP11.36□□□□□ -0.59
VEGFA-219ENST00000518824 EIF3KQ9UBQ5 218 aaKnown RBP11.36□□□□□ -0.59
VEGFA-219ENST00000518824 POLR1DQ9Y2S0 133 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 STARD10Q9Y365 291 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 GRIP1Q9Y3R0 1128 aa11.36□□□□□ -0.59
VEGFA-219ENST00000518824 NIPBLQ6KC79 2804 aaeCLIP11.36□□□□□ -0.593e-6■■□□□ 13.1
VEGFA-219ENST00000518824 SONP18583 2426 aaKnown RBP11.35□□□□□ -0.59
VEGFA-219ENST00000518824 LOC390937A0A1W2PQ73 354 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 ZSCAN5BA6NJL1 495 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 C17orf100A8MU93 164 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 WNT9BO14905 357 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 ICMTO60725 284 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 LILRA1O75019 489 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 ABHD16AO95870 558 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 IGHV3-13P01766 116 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 CSF3P09919 207 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 IGHV4-31P0DP07 118 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 COX5BP10606 129 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 USF1P22415 310 aaPredicted RBP11.35□□□□□ -0.59
VEGFA-219ENST00000518824 PRSS12P56730 875 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 RIN1Q13671 783 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 CCNIQ14094 377 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 SLC18B1Q6NT16 456 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 ACSM5Q6NUN0 579 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 DNM1P34Q6PK57 102 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 CD300LDQ6UXZ3 194 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 NAA40Q86UY6 237 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 ZNF786Q8N393 782 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 OR10S1Q8NGN2 331 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 MAP6Q96JE9 813 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 PIMREGQ9BSJ6 248 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 RBM4Q9BWF3 364 aaKnown RBP11.35□□□□□ -0.59
VEGFA-219ENST00000518824 MS4A5Q9H3V2 200 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 PNRC2Q9NPJ4 139 aaKnown RBP11.35□□□□□ -0.59
VEGFA-219ENST00000518824 HINT3Q9NQE9 182 aaKnown RBP11.35□□□□□ -0.59
VEGFA-219ENST00000518824 NDRG4Q9ULP0 352 aaKnown RBP11.35□□□□□ -0.59
VEGFA-219ENST00000518824 CACNG2Q9Y698 323 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 MALRD1Q5VYJ5 2156 aa11.35□□□□□ -0.59
VEGFA-219ENST00000518824 HIVEP2P31629 2446 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 C5orf63A6NC05 138 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 FAM183AA6NL82 134 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 GNGT2O14610 69 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 SPRY3O43610 288 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 CD5LO43866 347 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 CDC14BO60729 498 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 HLA-DQA2P01906 255 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 GIFP27352 417 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 MMP15P51511 669 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 CCL8P80075 99 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 COX10Q12887 443 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 PSG7Q13046 419 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 TSTQ16762 297 aaKnown RBP11.34□□□□□ -0.59
VEGFA-219ENST00000518824 ZNF718Q3SXZ3 478 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 MBNL2Q5VZF2 373 aaKnown RBP11.34□□□□□ -0.59
VEGFA-219ENST00000518824 RPL13AP3Q6NVV1 102 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 UTP4Q969X6 686 aaKnown RBP11.34□□□□□ -0.59
VEGFA-219ENST00000518824 WACQ9BTA9 647 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 NMNAT2Q9BZQ4 307 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 WDR76Q9H967 626 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 MSL2Q9HCI7 577 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 YAE1D1Q9NRH1 226 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 TREM2Q9NZC2 230 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 CYB5R1Q9UHQ9 305 aa11.34□□□□□ -0.59
VEGFA-219ENST00000518824 NAV3Q8IVL0 2385 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 ARRDC5A6NEK1 342 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 NDUFS8O00217 210 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 RP2O75695 350 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 IGHV1-46P01743 117 aa11.33□□□□□ -0.6
VEGFA-219ENST00000518824 ZNF16P17020 682 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms