RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 NSDHLQ15738 373 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 RBBP7Q16576 425 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TKFCQ3LXA3 575 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 IFI44LQ53G44 452 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TM4SF20Q53R12 229 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 XKR6Q5GH73 641 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 UBE2NLQ5JXB2 153 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SAMD13Q5VXD3 122 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SFRP4Q6FHJ7 346 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF585AQ6P3V2 769 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 WDR74Q6RFH5 385 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC36A1Q7Z2H8 476 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 C5orf24Q7Z6I8 188 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 VASH2Q86V25 355 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ARHGAP12Q8IWW6 846 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 IZUMO1Q8IYV9 350 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 GALNT16Q8N428 558 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 C17orf78Q8N4C9 275 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC5A8Q8N695 610 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 KLHDC1Q8N7A1 406 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM86B1Q8N7N1 296 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR13C4Q8NGS5 318 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR11L1Q8NGX0 322 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR6N1Q8NGY5 312 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR5AK2Q8NH90 309 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 HAVCR2Q8TDQ0 301 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ABHD3Q8WU67 409 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 DNAJB3Q8WWF6 145 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ASB17Q8WXJ9 295 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TFAP2BQ92481 460 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TOMM40LQ969M1 308 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 MRGPRFQ96AM1 343 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 RSPRY1Q96DX4 576 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 S100A16Q96FQ6 103 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 REEP6Q96HR9 211 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 PGAM5Q96HS1 289 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZFP3Q96NJ6 502 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 AMDHD1Q96NU7 426 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ABHD1Q96SE0 405 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADAT1Q9BUB4 502 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF747Q9BV97 191 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ELOVL1Q9BW60 279 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC17A9Q9BYT1 436 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SELENOIQ9C0D9 397 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZBP1Q9H171 429 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 MEGF9Q9H1U4 602 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 MOB1AQ9H8S9 216 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TBC1D17Q9HA65 648 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 INPP5EQ9NRR6 644 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM212BQ9NTI7 297 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 OBP2AQ9NY56 170 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 CNIH4Q9P003 139 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 DNAJB11Q9UBS4 358 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 PEF1Q9UBV8 284 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 COPS7AQ9UBW8 275 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TESQ9UGI8 421 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 FBXO4Q9UKT5 387 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF346Q9UL40 294 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 ASF1AQ9Y294 204 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 STRAPQ9Y3F4 350 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 HES2Q9Y543 173 aa4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 TNRC6CQ9HCJ0 1690 aaKnown RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 SIPA1L3O60292 1781 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P19-201ENST00000517578 KIAA1217Q5T5P2 1943 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 DOCK5Q9H7D0 1870 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 A0A0A6YYC8 382 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 A0A0U1RQK1 487 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF320A2RRD8 509 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR6C76A6NM76 312 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 DHRS7CA6NNS2 312 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PATE3B3GLJ2 98 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SUPT3HB4E1H0 165 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 UMAD1C9J7I0 102 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 I3L1I5 382 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CCL25O15444 150 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PLPP2O43688 288 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 LANCL1O43813 399 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 NDUFS3O75489 264 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 MT-CO2P00403 227 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CST4P01036 141 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 THY1P04216 161 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SOD3P08294 240 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC35G6P0C7Q6 338 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 JMJD7P0C870 316 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CALCBP10092 127 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 KCNE1P15382 129 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPX2P18283 190 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 GSTM3P21266 225 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 FCARP24071 287 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 MMP11P24347 488 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 TLX1P31314 330 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CEACAM8P31997 349 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 AVPR1AP37288 418 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PSMB10P40306 273 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR3A2P47893 321 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 NOVP48745 357 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 CAMLGP49069 296 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 SULT1A2P50226 295 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PPOXP50336 477 aa4.33□□□□□ -1.72
HMGB1P19-201ENST00000517578 PDLIM4P50479 330 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms