RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GGHQ92820 318 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 RNF166Q96A37 237 aaPredicted RBP8.57□□□□□ -1.04
CLN8-202ENST00000517514 MUCL1Q96DR8 90 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 POM121L2Q96KW2 1035 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 CNBD2Q96M20 576 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 SIGLEC11Q96RL6 698 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 CNN2Q99439 309 aaKnown RBP8.57□□□□□ -1.04
CLN8-202ENST00000517514 WACQ9BTA9 647 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 ABHD6Q9BV23 337 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 YIPF3Q9GZM5 350 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 FGF20Q9NP95 211 aaPredicted RBP8.57□□□□□ -1.04
CLN8-202ENST00000517514 PLCXD1Q9NUJ7 323 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 PLEKHB1Q9UF11 243 aaPredicted RBP8.57□□□□□ -1.04
CLN8-202ENST00000517514 PSORS1C1Q9UIG5 152 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLN8-202ENST00000517514 TIMM10BQ9Y5J6 103 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 IGHV2OR16-5A0A0B4J2B6 119 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 A0A1W2PQL4 384 aaPredicted RBP8.56□□□□□ -1.04
CLN8-202ENST00000517514 C5orf63A6NC05 138 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 M0R1B8 84 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 SGCEO43556 437 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 DOK2O60496 412 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 IGHA1P01876 353 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 CD40P25942 277 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 OTX1P32242 354 aaPredicted RBP8.56□□□□□ -1.04
CLN8-202ENST00000517514 GUCA1AP43080 201 aaPredicted RBP8.56□□□□□ -1.04
CLN8-202ENST00000517514 PCBD1P61457 104 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 NAAAQ02083 359 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 BSPH1Q075Z2 132 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 SCRN3Q0VDG4 424 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 EIF2B1Q14232 305 aaKnown RBP8.56□□□□□ -1.04
CLN8-202ENST00000517514 RAB35Q15286 201 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 MSMPQ1L6U9 139 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 ELFN2Q5R3F8 820 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 TMEM53Q6P2H8 277 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 TMEM154Q6P9G4 183 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 NAA40Q86UY6 237 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 SLC35F2Q8IXU6 374 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 GJC3Q8NFK1 279 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 OR1F12Q8NHA8 337 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 LILRB1Q8NHL6 650 aaPredicted RBP8.56□□□□□ -1.04
CLN8-202ENST00000517514 NANOS1Q8WY41 292 aaKnown RBP8.56□□□□□ -1.04
CLN8-202ENST00000517514 RFKQ969G6 155 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 SLAMF6Q96DU3 332 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 PLPPR2Q96GM1 343 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 Q96MT0 163 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 TBX5Q99593 518 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 TMEM204Q9BSN7 226 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 TTTY10Q9BZA0 68 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 RNF121Q9H920 327 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 CCNB1IP1Q9NPC3 277 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 DDX28Q9NUL7 540 aaKnown RBP8.56□□□□□ -1.04
CLN8-202ENST00000517514 SLCO1C1Q9NYB5 712 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 ABCA4P78363 2273 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 APCP25054 2843 aa8.56□□□□□ -1.04
CLN8-202ENST00000517514 PLCE1Q9P212 2302 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 SHISA9B4DS77 424 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 PSMD9O00233 223 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 SLC1A7O00341 560 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 SRSF10O75494 262 aaKnown RBP8.55□□□□□ -1.04
CLN8-202ENST00000517514 RAB36O95755 333 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 ABHD16AO95870 558 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 HTR1AP08908 422 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 LIMS3P0CW19 117 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 LIMS4P0CW20 117 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 COX5BP10606 129 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 HOXC12P31275 282 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 PEX19P40855 299 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 OPRL1P41146 370 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 WNT5AP41221 380 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 CXCR4P61073 352 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 ROM1Q03395 351 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 RAB40BQ12829 278 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 TMEM255AQ5JRV8 349 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 SPATC1Q76KD6 591 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 PRSS45Q7RTY3 260 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 ZNF454Q8N9F8 522 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 SLC30A7Q8NEW0 376 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 BPIFB6Q8NFQ5 453 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 THEM6Q8WUY1 208 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 NEUROG1Q92886 237 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 CDADC1Q9BWV3 514 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 JAM3Q9BX67 310 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 C1orf198Q9H425 327 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 POFUT1Q9H488 388 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 DUSP21Q9H596 190 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 PLEK2Q9NYT0 353 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 KCNN3Q9UGI6 736 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 MRM2Q9UI43 246 aaKnown RBP8.55□□□□□ -1.04
CLN8-202ENST00000517514 FBXL3Q9UKT7 428 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 POLR1DQ9Y2S0 133 aa8.55□□□□□ -1.04
CLN8-202ENST00000517514 RPL36Q9Y3U8 105 aaKnown RBP8.55□□□□□ -1.04
CLN8-202ENST00000517514 ROS1P08922 2347 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 HECTD1Q9ULT8 2610 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 A6NNC1 897 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 ATP6V1G2-DDX39BF2Z307 99 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 ICMTO60725 284 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 FAM20BO75063 409 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 NGFP01138 241 aa8.54□□□□□ -1.04
CLN8-202ENST00000517514 LYNP07948 512 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms