RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 LHX9Q9NQ69 397 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 MBNL1Q9NR56 388 aaKnown RBP1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 MMP26Q9NRE1 261 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 TM7SF3Q9NS93 570 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 C20orf141Q9NUB4 165 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 FAM86C1Q9NVL1 165 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 PLEKHJ1Q9NW61 149 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 SPHK1Q9NYA1 384 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 FRRS1LQ9P0K9 344 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 GSKIPQ9P0R6 139 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 LRIT1Q9P2V4 623 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 C19orf25Q9UFG5 118 aaPredicted RBP1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 TBC1D29Q9UFV1 150 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 PISDQ9UG56 409 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 ST6GALNAC2Q9UJ37 374 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 FBXL2Q9UKC9 423 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 PILRAQ9UKJ1 303 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR52A1Q9UKL2 312 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 TBX21Q9UL17 535 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 FLVCR2Q9UPI3 526 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 SLC7A11Q9UPY5 501 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 B3GALT5Q9Y2C3 310 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 RPH3AQ9Y2J0 694 aaPredicted RBP1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 NSG2Q9Y328 171 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMED7Q9Y3B3 224 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 STRAPQ9Y3F4 350 aaKnown RBP1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 ADAM18Q9Y3Q7 739 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF175Q9Y473 711 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 PCYT1BQ9Y5K3 369 aaPredicted RBP1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 HCFC2Q9Y5Z7 792 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 KPTNQ9Y664 436 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 SIRT4Q9Y6E7 314 aaPredicted RBP1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 R4GMQ9 66 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 CEP192Q8TEP8 1941 aa1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 TCF20Q9UGU0 1960 aaKnown RBP1.87□□□□□ -2.11
RNU1-40P-201ENST00000516816 CACNA1CQ13936 2221 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 TRBV5-7A0A0A0MS05 114 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A0A6YYC8 382 aaPredicted RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 IGKV1-8A0A0C4DH67 115 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 SPTY2D1-AS1A0A0U1RR47 76 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 TMEM272A0A1B0GTI8 110 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 LOC102725191A0A1B0GVB3 256 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 A0A1W2PPC1 479 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 FAM230AA0A1W2PPH8 454 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 PQLC2LA1A4F0 135 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZC3H12DA2A288 527 aaKnown RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 C9orf170A2RU37 121 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR2M5A3KFT3 312 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 CPED1A4D0V7 1026 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 LINC01553A4QN01 128 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 LRP5LA4QPB2 252 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 BTBD17A6NE02 478 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 NPIPB13A6NJU9 1138 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 OR4C45A6NMZ5 311 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF850A8MQ14 1090 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 A8MUA0 341 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 SERPINE3A8MV23 424 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 FAM171A2A8MVW0 826 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 VSTM5A8MXK1 200 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 B4DEV8 164 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 UMAD1C9J7I0 102 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 NPIPB4C9JG80 1138 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF878C9JN71 531 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 RNF223E7ERA6 249 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 H7C1Q1 480 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 TRIM77I1YAP6 450 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 I3L1I5 382 aaPredicted RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 M0R036 132 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 SULT2B1O00204 365 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 PSMD9O00233 223 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 MFNGO00587 321 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 PLPP3O14495 311 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 ADAM10O14672 748 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 TO15178 435 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 TOX3O15405 576 aaPredicted RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 ST8SIA3O43173 380 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 HCRTR1O43613 425 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 FADS1O60427 444 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 GPR137BO60478 399 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 EIF1BO60739 113 aaKnown RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZNF354AO60765 605 aaPredicted RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 SEMA7AO75326 666 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 MOSPD3O75425 235 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 PRKRAO75569 313 aaKnown RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 UPK3AO75631 287 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 CRTAPO75718 401 aaPredicted RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 RAD51DO75771 328 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 ZFAND5O76080 213 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 STK17BO94768 372 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 SCAF4O95104 1147 aaKnown RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 FARS2O95363 451 aaKnown RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 SFT2D2O95562 160 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 MPC2O95563 127 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 EPPINO95925 133 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 TBX6O95947 436 aaPredicted RBP1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 F10P00742 488 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 GHRHP01286 108 aa1.86□□□□□ -2.11
RNU1-40P-201ENST00000516816 IFNA1P01562 189 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms