RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MPZL1O95297 269 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 PPP1R3DO95685 299 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 IGHV2-5P01817 119 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 KITLGP21583 273 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 MSX2P35548 267 aaPredicted RBP8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 HIST1H3AP68431 136 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 MVKQ03426 396 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 PSG7Q13046 419 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 RFX4Q33E94 735 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 CCDC92Q53HC0 331 aaPredicted RBP8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 MTX3Q5HYI7 312 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 HIST2H3PS2Q5TEC6 136 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 OTPQ5XKR4 325 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 PGM2L1Q6PCE3 622 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 DNM1P34Q6PK57 102 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 C16orf89Q6UX73 402 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 HIST2H3AQ71DI3 136 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 MCUR1Q96AQ8 359 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 RAB39BQ96DA2 213 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 ERMAPQ96PL5 475 aaPredicted RBP8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 LRRC37BQ96QE4 947 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 CDRT15Q96T59 188 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 EGLN1Q9GZT9 426 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 LPAR2Q9HBW0 351 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 MSL2Q9HCI7 577 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 IL1RAPQ9NPH3 570 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 PLEK2Q9NYT0 353 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 MALRD1Q5VYJ5 2156 aa8.87□□□□□ -0.99
HMGXB3-205ENST00000514469 TRAV20A0A0B4J274 112 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 RER1O15258 196 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 TIMM8AO60220 97 aaPredicted RBP8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 OR10H3O60404 316 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 GPANK1O95872 356 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 CRABP1P29762 137 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 RRM2P31350 389 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 SLC6A6P31641 620 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 SRP14P37108 136 aaKnown RBP8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 GSSP48637 474 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 RGS6P49758 472 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 SRSF2Q01130 221 aaKnown RBP8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 CDK5R2Q13319 367 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 SPRNQ5BIV9 151 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 C1orf94Q6P1W5 598 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 LEG1Q6P5S2 330 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 ZNF620Q6ZNG0 422 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 Q6ZR03 302 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 JAZF1Q86VZ6 243 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 ZDHHC21Q8IVQ6 265 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 DEFB107AQ8IZN7 70 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 RFLNBQ8N5W9 214 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 OR1F12Q8NHA8 337 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 SLC7A6Q92536 515 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 RAB1CQ92928 201 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 TIMD4Q96H15 378 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 COG8Q96MW5 612 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 TSSK2Q96PF2 358 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 DCLRE1CQ96SD1 692 aaKnown RBP8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 COQ7Q99807 217 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 C19orf24Q9BVV8 132 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 HDHD2Q9H0R4 259 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 RERGLQ9H628 205 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 G6PC2Q9NQR9 355 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 PURGQ9UJV8 347 aaKnown RBP8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 POLR1DQ9Y2S0 133 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 STARD10Q9Y365 291 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 GRIP1Q9Y3R0 1128 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 LHFPL6Q9Y693 200 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 TANC2Q9HCD6 1990 aa8.86□□□□□ -0.99
HMGXB3-205ENST00000514469 TCF21O43680 179 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 PNPP00491 289 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 DBHP09172 617 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 ANPEPP15144 967 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 HIST1H1CP16403 213 aaKnown RBP8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 ATP6V1B2P21281 511 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 IFNGR2P38484 337 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 MAGEA2P43356 314 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 ERFP50548 548 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 TNFAIP6P98066 277 aaPredicted RBP8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 SLC3A1Q07837 685 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 COX10Q12887 443 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 TSPAN31Q12999 210 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 MEP1BQ16820 701 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 ACSM5Q6NUN0 579 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 PGBD2Q6P3X8 592 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 FBXW12Q6X9E4 464 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 ZBTB46Q86UZ6 589 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 OR6V1Q8N148 313 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 GJC3Q8NFK1 279 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 SLC26A10Q8NG04 563 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 CCL17Q92583 94 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 HAVCR1Q96D42 359 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 CMBLQ96DG6 245 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 SAMD8Q96LT4 415 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 NMNAT3Q96T66 252 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 IFT27Q9BW83 186 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 ACTR3BQ9P1U1 418 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 TMCC3Q9ULS5 477 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 B9D1Q9UPM9 204 aa8.85□□□□□ -0.99
HMGXB3-205ENST00000514469 LYVE1Q9Y5Y7 322 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms