RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	ARRDC3	Q96B67	414 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	SMIM8	Q96KF7	97 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	RNF126	Q9BV68	326 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	SGPP1	Q9BX95	441 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	TAF9B	Q9HBM6	251 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	OR5AC2	Q9NZP5	309 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	SVIL	O95425	2214 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	PRAMEF26	H0Y7S4	382 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	PPP1R2P9	O14990	202 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	NME2P1	O60361	137 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	IFNG	P01579	166 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	ITGA5	P08648	1049 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	FRK	P42685	505 aa	Predicted RBP	10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	NUTF2	P61970	127 aa	Known RBP	10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	C2orf76	Q3KRA6	126 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582		Q499Y3	187 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	DNM1P46	Q6ZS02	220 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	C7orf61	Q8IZ16	206 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	COX18	Q8N8Q8	333 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	SLC16A11	Q8NCK7	471 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	NMNAT3	Q96T66	252 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	MS4A8	Q9BY19	250 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	DPEP2	Q9H4A9	486 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	IKZF2	Q9UKS7	526 aa		10.07	□□□□□ -0.8
PDCD6-210	ENST00000513582	EYS	Q5T1H1	3165 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZNF727	A8MUV8	499 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	FAM157A	C9JC47	383 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	TSPAN15	O95858	294 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ERCC1	P07992	297 aa	Predicted RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	PMEL	P40967	661 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	RAP1A	P62834	184 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	OR1Q1	Q15612	314 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZNF563	Q8TA94	476 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	CDS1	Q92903	461 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	MR1	Q95460	341 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	SEH1L	Q96EE3	360 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ASB16	Q96NS5	453 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	SMIM3	Q9BZL3	60 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	PTGES2	Q9H7Z7	377 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.06	□□□□□ -0.8	3e-8	■■■□□ 17.7
PDCD6-210	ENST00000513582	IER3IP1	Q9Y5U9	82 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	SCN10A	Q9Y5Y9	1956 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZBTB25	P24278	435 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	RPS27	P42677	84 aa	Known RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	S100A10	P60903	97 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	NAAA	Q02083	359 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZNF343	Q6P1L6	599 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	TMEM104	Q8NE00	496 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	WDR34	Q96EX3	536 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	CNRIP1	Q96F85	164 aa	Predicted RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	THOC3	Q96J01	351 aa	Known RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	LYSMD1	Q96S90	227 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	PRSS16	Q9NQE7	514 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	SLC2A4RG	Q9NR83	387 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	FAM86C1	Q9NVL1	165 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	TP53TG5	Q9Y2B4	290 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	TVP23A	A6NH52	213 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	EREG	O14944	169 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	BRINP1	O60477	761 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZNF25	P17030	456 aa	Predicted RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	PRLHR	P49683	370 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	SRSF5	Q13243	272 aa	Known RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	C4orf17	Q53FE4	359 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ERN2	Q76MJ5	926 aa	Known RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	RANBP3L	Q86VV4	465 aa	Predicted RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZNF676	Q8N7Q3	588 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	PLPP7	Q8NBV4	271 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZPLD1	Q8TCW7	415 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	SAT2	Q96F10	170 aa	Predicted RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	DTD2	Q96FN9	168 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	MRI1	Q9BV20	369 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	GSKIP	Q9P0R6	139 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZNF223	Q9UK11	482 aa	Predicted RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	MED31	Q9Y3C7	131 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	FBXO7	Q9Y3I1	522 aa		10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10.06	□□□□□ -0.8
PDCD6-210	ENST00000513582	SDK2	Q58EX2	2172 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582		A0A1W2PPC1	479 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	DOK2	O60496	412 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	ADAP1	O75689	374 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	GDI1	P31150	447 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	RAB4B	P61018	213 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	EXOSC7	Q15024	291 aa	Known RBP	10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	ELOC	Q15369	112 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	ELOA3B	Q3SY89	546 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	C19orf47	Q8N9M1	422 aa	Known RBP	10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	ELOA3	Q8NG57	546 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	OR51F2	Q8NH61	342 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	GPX8	Q8TED1	209 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	PHYHIP	Q92561	330 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	FAM3D	Q96BQ1	224 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	SLC35A4	Q96G79	324 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	ZNF426	Q9BUY5	554 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	SRMS	Q9H3Y6	488 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	HAO2	Q9NYQ3	351 aa		10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	SRPX2	O60687	465 aa	Predicted RBP	10.05	□□□□□ -0.8
PDCD6-210	ENST00000513582	PLG	P00747	810 aa	Predicted RBP	10.05	□□□□□ -0.8

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