RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ENDOGQ14249 297 aaKnown RBP9.05□□□□□ -0.96
DDX41-216ENST00000513562 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 ENTPD8Q5MY95 495 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 CD276Q5ZPR3 534 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 SLC2A7Q6PXP3 512 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 Q6ZTK2 550 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 VASH1Q7L8A9 365 aaPredicted RBP9.05□□□□□ -0.96
DDX41-216ENST00000513562 SYT9Q86SS6 491 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 MOGAT3Q86VF5 341 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 TSPYL5Q86VY4 417 aaPredicted RBP9.05□□□□□ -0.96
DDX41-216ENST00000513562 MSRB3Q8IXL7 192 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 C1orf87Q8N0U7 546 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 GALNT4Q8N4A0 578 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 GOLGA6L1Q8N7Z2 621 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 OR6T1Q8NGN1 323 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 OR9I1Q8NGQ6 314 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 ADAMTS16Q8TE57 1224 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 PTP4A1Q93096 173 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 LHX4Q969G2 390 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 MPP4Q96JB8 637 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 SIRPDQ9H106 197 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 TMEM38AQ9H6F2 299 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 MEPEQ9NQ76 525 aaPredicted RBP9.05□□□□□ -0.96
DDX41-216ENST00000513562 INIPQ9NRY2 104 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 VPREB3Q9UKI3 123 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 SLC7A7Q9UM01 511 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 STARD10Q9Y365 291 aa9.05□□□□□ -0.96
DDX41-216ENST00000513562 DNAH9Q9NYC9 4486 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 TRPC5OSA6NMA1 111 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 TSPAN19P0C672 248 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 RAC2P15153 192 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 SLC6A2P23975 617 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 TGFBR2P37173 567 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 PMELP40967 661 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 AQP2P41181 271 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 DBPQ10586 325 aaPredicted RBP9.04□□□□□ -0.96
DDX41-216ENST00000513562 COX10Q12887 443 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 STX3Q13277 289 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 LRIF1Q5T3J3 769 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 METTL11BQ5VVY1 283 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 C11orf87Q6NUJ2 197 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 OR5AS1Q8N127 324 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 PIP4P2Q8N4L2 257 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 SMYD1Q8NB12 490 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 SCCPDHQ8NBX0 429 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 OR13G1Q8NGZ3 307 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 CFHR4Q92496 578 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 MAELQ96JY0 434 aaKnown RBP9.04□□□□□ -0.96
DDX41-216ENST00000513562 COG8Q96MW5 612 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 TECTBQ96PL2 329 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 ALG12Q9BV10 488 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 RASSF4Q9H2L5 321 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 CTSZQ9UBR2 303 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 FBLN5Q9UBX5 448 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 GMEB1Q9Y692 573 aa9.04□□□□□ -0.96
DDX41-216ENST00000513562 COL7A1Q02388 2944 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 IGHV3-64DA0A0J9YX35 117 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 TRAPPC13A5PLN9 417 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 C12orf71A8MTZ7 269 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 MLNRO43193 412 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 MSR1P21757 451 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 GATA4P43694 442 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 HTR5AP47898 357 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 IFFO1Q0D2I5 559 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 DUSP7Q16829 419 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 NXNQ6DKJ4 435 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 FBXW12Q6X9E4 464 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 RBM45Q8IUH3 476 aaKnown RBP9.03□□□□□ -0.96
DDX41-216ENST00000513562 CLDN22Q8N7P3 220 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 PNLDC1Q8NA58 520 aaKnown RBP9.03□□□□□ -0.96
DDX41-216ENST00000513562 OR8G5Q8NG78 346 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 GPR32P1Q8NGA4 272 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 OR4D11Q8NGI4 311 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 MOSPD2Q8NHP6 518 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 Q8TCH9 128 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 SGCDQ92629 289 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 PRSS27Q9BQR3 290 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 WACQ9BTA9 647 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 ROPN1BQ9BZX4 212 aaPredicted RBP9.03□□□□□ -0.96
DDX41-216ENST00000513562 PCDHAC1Q9H158 963 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 IKZF5Q9H5V7 419 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 ROPN1Q9HAT0 212 aaPredicted RBP9.03□□□□□ -0.96
DDX41-216ENST00000513562 ZNRD1Q9P1U0 126 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 ANGPT4Q9Y264 503 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 USH1CQ9Y6N9 552 aa9.03□□□□□ -0.96
DDX41-216ENST00000513562 TRBV5-3A0A0A0MS03 114 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 A0A1B0GWJ7 208 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 BTBD17A6NE02 478 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 F5H5P2 479 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 J3QW42 95 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 XPNPEP2O43895 674 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 DOK2O60496 412 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 OR7A10O76100 309 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 IGF2P01344 180 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 MT-ND1P03886 318 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 IRF2P14316 349 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 FUT1P19526 365 aa9.02□□□□□ -0.97
DDX41-216ENST00000513562 PPIBP23284 216 aaKnown RBP9.02□□□□□ -0.97
DDX41-216ENST00000513562 GUCA1AP43080 201 aaPredicted RBP9.02□□□□□ -0.97
DDX41-216ENST00000513562 SCRN3Q0VDG4 424 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms