RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 PPIDQ08752 370 aaKnown RBP3.45□□□□□ -1.86
CHD1-209ENST00000512844 PMS2P3Q13401 168 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 ITIH4Q14624 930 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 SLC15A2Q16348 729 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 SLC5A12Q1EHB4 618 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 TIGITQ495A1 244 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 GGTA1PQ4G0N0 100 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 TMEM31Q5JXX7 168 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 C22orf42Q6IC83 251 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 OR52W1Q6IF63 320 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 HSDL2Q6YN16 418 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 CMTM8Q8IZV2 173 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 CLEC4FQ8N1N0 589 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 C8orf31Q8N9H6 132 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 OR8J2Q8NGG1 315 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 NANPQ8TBE9 248 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 MRPS31Q92665 395 aaKnown RBP3.45□□□□□ -1.86
CHD1-209ENST00000512844 MYDGFQ969H8 173 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 ZNF514Q96K75 400 aaPredicted RBP3.45□□□□□ -1.86
CHD1-209ENST00000512844 PGLYRP4Q96LB8 373 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 SLC6A7Q99884 636 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 ZNF251Q9BRH9 671 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 PELOQ9BRX2 385 aaKnown RBP3.45□□□□□ -1.86
CHD1-209ENST00000512844 OR51V1Q9H2C8 321 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 MED4Q9NPJ6 270 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 B3GNT2Q9NY97 397 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 MYEF2Q9P2K5 600 aaKnown RBP3.45□□□□□ -1.86
CHD1-209ENST00000512844 ZNF223Q9UK11 482 aaPredicted RBP3.45□□□□□ -1.86
CHD1-209ENST00000512844 TIMM10BQ9Y5J6 103 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 KPTNQ9Y664 436 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 KIF24Q5T7B8 1368 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 ANKRD36BQ8N2N9 1353 aa3.45□□□□□ -1.86
CHD1-209ENST00000512844 PTPRTO14522 1441 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 ZFYVE9O95405 1425 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 NSD3Q9BZ95 1437 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 TRAPPC8Q9Y2L5 1435 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 TET3O43151 1660 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 SETBP1Q9Y6X0 1596 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 UHRF1BP1LA0JNW5 1464 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 IQSEC2Q5JU85 1478 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 TRBV6-6A0A0A6YYG2 114 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 IGHV2-70DA0A0C4DH43 119 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 TMEM213A2RRL7 107 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 A6NDX4 124 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 OR6C70A6NIJ9 312 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 RNASEK-C17orf49H0YIS7 233 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 DLGAP1O14490 977 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 NDUFAB1O14561 156 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 RFXANKO14593 260 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 EIF3HO15372 352 aaKnown RBP eCLIP3.44□□□□□ -1.86
CHD1-209ENST00000512844 MSH4O15457 936 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 COCHO43405 550 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 PRKYO43930 277 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 ZNF780AO75290 641 aaPredicted RBP3.44□□□□□ -1.86
CHD1-209ENST00000512844 FARS2O95363 451 aaKnown RBP3.44□□□□□ -1.86
CHD1-209ENST00000512844 PMCHP20382 165 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 HTR1FP30939 366 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 HPCAL1P37235 193 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 MAGEA2P43356 314 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 PRKXP51817 358 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 RAB14P61106 215 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 SELENOTP62341 195 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 IRF8Q02556 426 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 ILKQ13418 452 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 GK3PQ14409 553 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 DNAL1Q4LDG9 190 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 TIGD3Q6B0B8 471 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 TMPRSS11AQ6ZMR5 421 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 ABHD12BQ7Z5M8 362 aaPredicted RBP3.44□□□□□ -1.86
CHD1-209ENST00000512844 DHDDSQ86SQ9 333 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 CRLF3Q8IUI8 442 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 SLC35F2Q8IXU6 374 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 LRRC34Q8IZ02 419 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 SELENOHQ8IZQ5 122 aaKnown RBP3.44□□□□□ -1.86
CHD1-209ENST00000512844 ZNF433Q8N7K0 673 aaPredicted RBP3.44□□□□□ -1.86
CHD1-209ENST00000512844 FAM86B1Q8N7N1 296 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 Q8N9W7 124 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 OR1L6Q8NGR2 347 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 DNAJC1Q96KC8 554 aaKnown RBP3.44□□□□□ -1.86
CHD1-209ENST00000512844 XPO6Q96QU8 1125 aaKnown RBP3.44□□□□□ -1.86
CHD1-209ENST00000512844 CLCC1Q96S66 551 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 TMEM246Q9BRR3 403 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 UPF3BQ9BZI7 483 aaKnown RBP3.44□□□□□ -1.86
CHD1-209ENST00000512844 SRRQ9GZT4 340 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 ANKRD19PQ9H560 264 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 SLC17A5Q9NRA2 495 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 GPATCH2LQ9NWQ4 482 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 MS4A12Q9NXJ0 267 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 ZNF229Q9UJW7 825 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 POLDIP2Q9Y2S7 368 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 CEP152O94986 1710 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 CDC42BPBQ9Y5S2 1711 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 MYO3AQ8NEV4 1616 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 ARHGAP31Q2M1Z3 1444 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 FRMPD4Q14CM0 1322 aa3.44□□□□□ -1.86
CHD1-209ENST00000512844 CFAP74Q9C0B2 1584 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 PLA2R1Q13018 1463 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 ZNF518AQ6AHZ1 1483 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 A0A1W2PPE3 182 aa3.43□□□□□ -1.86
CHD1-209ENST00000512844 A0A1W2PRF3 423 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms