RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 HCAR3P49019 387 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 GFERP55789 205 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 SLC25A11Q02978 314 aaKnown RBP0.55□□□□□ -2.32
PDGFC-208ENST00000512711 MAD2L1BPQ15013 274 aaPredicted RBP0.55□□□□□ -2.32
PDGFC-208ENST00000512711 TPD52L1Q16890 204 aaPredicted RBP0.55□□□□□ -2.32
PDGFC-208ENST00000512711 TMEM69Q5SWH9 247 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 OR4F6Q8NGB9 312 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 OR1L6Q8NGR2 347 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 THRSPQ92748 146 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 DTNBP1Q96EV8 351 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 GALNT14Q96FL9 552 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 DUS3LQ96G46 650 aaKnown RBP0.55□□□□□ -2.32
PDGFC-208ENST00000512711 COQ2Q96H96 371 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 ZBED3Q96IU2 234 aaPredicted RBP0.55□□□□□ -2.32
PDGFC-208ENST00000512711 CNDP1Q96KN2 507 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 TCEANC2Q96MN5 208 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 C18orf15Q96N68 181 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 SEC22CQ9BRL7 303 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 ANKRD19PQ9H560 264 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 PARP11Q9NR21 331 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 POLE3Q9NRF9 147 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 ZNF492Q9P255 531 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 VANGL2Q9ULK5 521 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 ATP6V0A2Q9Y487 856 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 MAPK8IP3Q9UPT6 1336 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 RPRD2Q5VT52 1461 aaKnown RBP0.54□□□□□ -2.32
PDGFC-208ENST00000512711 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 IGHV3-49A0A0A0MS15 119 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 IGHV1-3A0A0C4DH29 117 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 A0A1B0GVL5 298 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 OR6C74A6NCV1 312 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 GABRR3A8MPY1 467 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 NDUFC2-KCTD14E9PQ53 114 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 K7EPI3 171 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 K7EQM0 130 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 PPP1R2P9O14990 202 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 SMPD2O60906 423 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 SCGNO76038 276 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 GLSO94925 669 aaPredicted RBP0.54□□□□□ -2.32
PDGFC-208ENST00000512711 EIF4EP06730 217 aaKnown RBP0.54□□□□□ -2.32
PDGFC-208ENST00000512711 RAB3AP20336 220 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 KLHL12Q53G59 568 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 YIF1BQ5BJH7 314 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 TCEAL5Q5H9L2 206 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 RIPPLY2Q5TAB7 128 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 MED27Q6P2C8 311 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 PSTKQ8IV42 348 aaKnown RBP0.54□□□□□ -2.32
PDGFC-208ENST00000512711 ZNF645Q8N7E2 425 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 LRRC75AQ8NAA5 344 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 OR1S2Q8NGQ3 325 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 TCEAL3Q969E4 200 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 ZNF607Q96SK3 696 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 SAMD10Q9BYL1 202 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 ODF2LQ9ULJ1 636 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 ING4Q9UNL4 249 aa0.54□□□□□ -2.32
PDGFC-208ENST00000512711 LAMB2P55268 1798 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 IGLV10-54A0A075B6I4 117 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 SLC22A5O76082 557 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 CLIC3O95833 236 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 IGHV3-11P01762 117 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 IGKV1-16P04430 117 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 KRT8P05787 483 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 CD28P10747 220 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 CD37P11049 281 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 GPX4P36969 197 aaPredicted RBP0.53□□□□□ -2.32
PDGFC-208ENST00000512711 P2RX1P51575 399 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 RPL23P62829 140 aaKnown RBP0.53□□□□□ -2.32
PDGFC-208ENST00000512711 CCNA1P78396 465 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 ELF3P78545 371 aaPredicted RBP0.53□□□□□ -2.32
PDGFC-208ENST00000512711 DEFB103AP81534 67 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 FGL1Q08830 312 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 GK3PQ14409 553 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 DMC1Q14565 340 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 SLC9A3R2Q15599 337 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 PGGHGQ32M88 737 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 PCOTHQ58A44 107 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 PRSS54Q6PEW0 395 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 USP50Q70EL3 339 aaPredicted RBP0.53□□□□□ -2.32
PDGFC-208ENST00000512711 NT5DC3Q86UY8 548 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 COX18Q8N8Q8 333 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 C11orf72Q8NBR9 251 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 SDR9C7Q8NEX9 313 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 CPNE4Q96A23 557 aaPredicted RBP0.53□□□□□ -2.32
PDGFC-208ENST00000512711 GPR82Q96P67 336 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 MARVELD1Q9BSK0 173 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 TMEM9BQ9NQ34 198 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 SLC35D1Q9NTN3 355 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 PIGLQ9Y2B2 252 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 KIF3AQ9Y496 699 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 LOXHD1Q8IVV2 1947 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.32
PDGFC-208ENST00000512711 PALLDQ8WX93 1383 aa0.53□□□□□ -2.32
PDGFC-208ENST00000512711 DOCK6Q96HP0 2047 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 TIMM8AO60220 97 aaPredicted RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 EIF1BO60739 113 aaKnown RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 SNNO75324 88 aaPredicted RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 RDH16O75452 317 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 IDH1O75874 414 aaKnown RBP0.52□□□□□ -2.33
PDGFC-208ENST00000512711 ACSM4P0C7M7 580 aa0.52□□□□□ -2.33
PDGFC-208ENST00000512711 PABPC4LP0CB38 370 aaKnown RBP0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms