RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 TNFSF4P23510 183 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 CDAP32320 146 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 GZMMP51124 257 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 ARFIP2P53365 341 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 RAP1BP61224 184 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 RPL27P61353 136 aaKnown RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 PPP1CBP62140 327 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 RAP1AP62834 184 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 PSG4Q00888 419 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 GLO1Q04760 184 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 PIN1Q13526 163 aaPredicted RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 TTMPQ5BVD1 217 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 RABL3Q5HYI8 236 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 MBNL2Q5VZF2 373 aaKnown RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 SLC25A47Q6Q0C1 308 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 RBMS3Q6XE24 437 aaKnown RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 NKAIN4Q8IVV8 208 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 BPIFB2Q8N4F0 458 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 PCYOX1LQ8NBM8 494 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 BVESQ8NE79 360 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 MOSPD2Q8NHP6 518 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 PFN4Q8NHR9 129 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 SGMS2Q8NHU3 365 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 KLF14Q8TD94 323 aaPredicted RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 IPCEF1Q8WWN9 437 aaPredicted RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 NSMAFQ92636 917 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 NABP1Q96AH0 204 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 LRRC58Q96CX6 371 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 BPIFA2Q96DR5 249 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 MARS2Q96GW9 593 aaKnown RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 C4orf45Q96LM5 186 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 WACQ9BTA9 647 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 PLA2G12AQ9BZM1 189 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 OR2J1Q9GZK6 312 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 NDEL1Q9GZM8 345 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 TUBG2Q9NRH3 451 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 C20orf141Q9NUB4 165 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 GID8Q9NWU2 228 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 NDRG4Q9ULP0 352 aaKnown RBP6.09□□□□□ -1.43
USP46-208ENST00000512656 AP3M1Q9Y2T2 418 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 UGT2A1Q9Y4X1 527 aa6.09□□□□□ -1.43
USP46-208ENST00000512656 LOC100509620A0A075B734 347 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 PPIAL4EA0A075B759 164 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 PPIAL4CA0A0B4J2A2 164 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 TMEM89A2RUT3 159 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 PPIAL4DF5H284 164 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 FBP2O00757 339 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 MRASO14807 208 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 SURF4O15260 269 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 SPRY1O43609 319 aaPredicted RBP6.08□□□□□ -1.44
USP46-208ENST00000512656 AHCYL1O43865 530 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 TIMM8AO60220 97 aaPredicted RBP6.08□□□□□ -1.44
USP46-208ENST00000512656 SHOX2O60902 331 aaPredicted RBP6.08□□□□□ -1.44
USP46-208ENST00000512656 FOXH1O75593 365 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 IGHV1-46P01743 117 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 IGHMP01871 453 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 PPIAL4FP0DN26 164 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 TROVE2P10155 538 aaKnown RBP eCLIP6.08□□□□□ -1.44
USP46-208ENST00000512656 IFI30P13284 250 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 TNFRSF1AP19438 455 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 TNFRSF1BP20333 461 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 MAKP20794 623 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 MSR1P21757 451 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 LAP3P28838 519 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 KDELR2P33947 212 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 MPV17P39210 176 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 WNT5AP41221 380 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 OR1E2P47887 323 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 SLC9A3P48764 834 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 MMP15P51511 669 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 CRYBA2P53672 197 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 CTXN1P60606 82 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 ERVK-25P63136 954 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 FMODQ06828 376 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 TOP3AQ13472 1001 aaPredicted RBP6.08□□□□□ -1.44
USP46-208ENST00000512656 LRRC23Q53EV4 343 aaPredicted RBP6.08□□□□□ -1.44
USP46-208ENST00000512656 CYBRD1Q53TN4 286 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 SPATA46Q5T0L3 261 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 OAFQ86UD1 273 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 CALHM3Q86XJ0 350 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 ZNF101Q8IZC7 436 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 SPICQ8N5J4 248 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 NPEPL1Q8NDH3 523 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 AKR7LQ8NHP1 331 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 SLC25A40Q8TBP6 338 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 C10orf82Q8WW14 230 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 HDAC2Q92769 488 aaKnown RBP6.08□□□□□ -1.44
USP46-208ENST00000512656 NMD3Q96D46 503 aaKnown RBP6.08□□□□□ -1.44
USP46-208ENST00000512656 TPD52L3Q96J77 140 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 PRRC1Q96M27 445 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 COG8Q96MW5 612 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 ZNF583Q96ND8 569 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 FNDC11Q9BVV2 318 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 OR2H1Q9GZK4 316 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 WNT5BQ9H1J7 359 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 VIPAS39Q9H9C1 493 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 NTN4Q9HB63 628 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 MAN2C1Q9NTJ4 1040 aa6.08□□□□□ -1.44
USP46-208ENST00000512656 DDX28Q9NUL7 540 aaKnown RBP6.08□□□□□ -1.44
USP46-208ENST00000512656 ARGLU1Q9NWB6 273 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms