RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 LINC00346Q8IVM7 164 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 CYB561A3Q8NBI2 242 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 OR2T29Q8NH02 315 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 RDH5Q92781 318 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 ASB9Q96DX5 294 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 LRGUKQ96M69 825 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 MAGIXQ9H6Y5 334 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 SLCO1C1Q9NYB5 712 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 NDRG4Q9ULP0 352 aaKnown RBP11.33□□□□□ -0.6
RNF4-215ENST00000511843 STARD10Q9Y365 291 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 SAMHD1Q9Y3Z3 626 aaKnown RBP11.33□□□□□ -0.6
RNF4-215ENST00000511843 CDH10Q9Y6N8 788 aa11.33□□□□□ -0.6
RNF4-215ENST00000511843 OR6C6A6NF89 314 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 BHLHE40O14503 412 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 RP2O75695 350 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 IGHV1-46P01743 117 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 TACSTD2P09758 323 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 COX5BP10606 129 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 IGFBP5P24593 272 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 CRABP1P29762 137 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 PYCR1P32322 319 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 GPR6P46095 362 aaPredicted RBP11.32□□□□□ -0.6
RNF4-215ENST00000511843 ZNF81P51508 661 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 MMP15P51511 669 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 CHN2P52757 468 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 LSM6P62312 80 aaKnown RBP11.32□□□□□ -0.6
RNF4-215ENST00000511843 KCNMB1Q16558 191 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 MBNL2Q5VZF2 373 aaKnown RBP11.32□□□□□ -0.6
RNF4-215ENST00000511843 DNM1P34Q6PK57 102 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 LYPD4Q6UWN0 246 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 CFAP77Q6ZQR2 320 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 HIPK1Q86Z02 1210 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 ADGRG5Q8IZF4 528 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 ZNF540Q8NDQ6 660 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 SLC26A10Q8NG04 563 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 OR52L1Q8NGH7 329 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 OR1F12Q8NHA8 337 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 ZNRF4Q8WWF5 429 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 TRIM15Q9C019 465 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 C1orf21Q9H246 121 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 REEP1Q9H902 201 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 MSL2Q9HCI7 577 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 TBC1D23Q9NUY8 699 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 TREM2Q9NZC2 230 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 GPR160Q9UJ42 338 aa11.32□□□□□ -0.6
RNF4-215ENST00000511843 GYG2O15488 501 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 PPIHO43447 177 aaKnown RBP11.31□□□□□ -0.6
RNF4-215ENST00000511843 TIMM8AO60220 97 aaPredicted RBP11.31□□□□□ -0.6
RNF4-215ENST00000511843 LMX1BO60663 402 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 ICMTO60725 284 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 TGFAP01135 160 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 HLA-DQA2P01906 255 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 ACHEP22303 614 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 RPS27P42677 84 aaKnown RBP11.31□□□□□ -0.6
RNF4-215ENST00000511843 ARHGDIAP52565 204 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 TEKQ02763 1124 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 PSG7Q13046 419 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 MICAQ29983 383 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 CHRFAM7AQ494W8 412 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 AVPI1Q5T686 147 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 FAM166AQ6J272 317 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 UNQ6126/PRO20091Q6UXV3 157 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 RASSF6Q6ZTQ3 369 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 USP51Q70EK9 711 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 TMEM179BQ7Z7N9 219 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 NPEPL1Q8NDH3 523 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 OR51L1Q8NGJ5 315 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 OR9Q1Q8NGQ5 310 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 OR4Q3Q8NH05 313 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 CLDND2Q8NHS1 167 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 CANT1Q8WVQ1 401 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 SLC7A6OSQ96CW6 309 aaPredicted RBP11.31□□□□□ -0.6
RNF4-215ENST00000511843 CHID1Q9BWS9 393 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 ARMC1Q9NVT9 282 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 MRPL22Q9NWU5 206 aaKnown RBP11.31□□□□□ -0.6
RNF4-215ENST00000511843 PTTG3PQ9NZH4 202 aa11.31□□□□□ -0.6
RNF4-215ENST00000511843 CUBNO60494 3623 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 PLSCR5A0PG75 271 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 TVP23AA6NH52 213 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 IDH3BO43837 385 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 CST1P01037 141 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 RAP2AP10114 183 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 PSKH1P11801 424 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 PRSS12P56730 875 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 HIST1H3AP68431 136 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 MVKQ03426 396 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 HLXQ14774 488 aaPredicted RBP11.3□□□□□ -0.6
RNF4-215ENST00000511843 ZNF362Q5T0B9 420 aaPredicted RBP11.3□□□□□ -0.6
RNF4-215ENST00000511843 HIST2H3PS2Q5TEC6 136 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 SLC18B1Q6NT16 456 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 ARL9Q6T311 187 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 HIST2H3AQ71DI3 136 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 ZNF771Q7L3S4 317 aaPredicted RBP11.3□□□□□ -0.6
RNF4-215ENST00000511843 ZBTB46Q86UZ6 589 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 SLC37A3Q8NCC5 494 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 OR10G2Q8NGC3 310 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 NIPSNAP1Q9BPW8 284 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 WACQ9BTA9 647 aa11.3□□□□□ -0.6
RNF4-215ENST00000511843 TSSK6Q9BXA6 273 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms