RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 OR4Q3Q8NH05 313 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 KLF14Q8TD94 323 aaPredicted RBP13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 ZNRF4Q8WWF5 429 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 SLC7A6Q92536 515 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 NIPSNAP1Q9BPW8 284 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 OR2J1Q9GZK6 312 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 RACGAP1Q9H0H5 632 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 ELOVL3Q9HB03 270 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 HINT3Q9NQE9 182 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 PLEK2Q9NYT0 353 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 GPR160Q9UJ42 338 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 LHFPL6Q9Y693 200 aa13.79□□□□□ -0.2
PDLIM5-216ENST00000511767 A0A1W2PPW3 197 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 C17orf100A8MU93 164 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 TUBG1P23258 451 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 GGT2P36268 569 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 MPV17P39210 176 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 PPP1CBP62140 327 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 GLO1Q04760 184 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 SPATA46Q5T0L3 261 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 ARL9Q6T311 187 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 CYB561A3Q8NBI2 242 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 ICA1LQ8NDH6 482 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 OR52L1Q8NGH7 329 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 PIMREGQ9BSJ6 248 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 FN3KQ9H479 309 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 NTN4Q9HB63 628 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 TUBG2Q9NRH3 451 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 MRPL22Q9NWU5 206 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 NKIRAS2Q9NYR9 191 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 BAIAP2Q9UQB8 552 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 GRIP1Q9Y3R0 1128 aa13.78□□□□□ -0.2
PDLIM5-216ENST00000511767 IGHV4-61A0A0C4DH41 118 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 INAFM1C9JVW0 142 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 GNGT2O14610 69 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 TLX2O43763 284 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 DOK2O60496 412 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 LILRA1O75019 489 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 FKBP6O75344 327 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 PRKACGP22612 351 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 GCH1P30793 250 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 MAGEB1P43366 347 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 HTR5AP47898 357 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 RASSF2P50749 326 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 MMP15P51511 669 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 ARHGDIAP52565 204 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 PSG7Q13046 419 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 NKPD1Q17RQ9 610 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 SLC36A3Q495N2 470 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 CORO6Q6QEF8 472 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 RFPL4BQ6ZWI9 263 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 SLC37A3Q8NCC5 494 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 RDH5Q92781 318 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 RBM4Q9BWF3 364 aaKnown RBP13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 NMNAT2Q9BZQ4 307 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 BPESC1Q9GZL8 116 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 PDP1Q9P0J1 537 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 DNAJB9Q9UBS3 223 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 CYB5R1Q9UHQ9 305 aa13.77□□□□□ -0.21
PDLIM5-216ENST00000511767 ARRDC5A6NEK1 342 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 SOX14O95416 240 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 ABHD16AO95870 558 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 DBHP09172 617 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 PYCR1P32322 319 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 TMEM33P57088 247 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 CBX1P83916 185 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 GGTLC2Q14390 218 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 KRTAP27-1Q3LI81 207 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 SLC18B1Q6NT16 456 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 ACSM5Q6NUN0 579 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 TMEM154Q6P9G4 183 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 HS3ST5Q8IZT8 346 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 GTF3AQ92664 365 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 PTP4A1Q93096 173 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 YIPF5Q969M3 257 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 HAVCR1Q96D42 359 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 CMBLQ96DG6 245 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 DCLRE1CQ96SD1 692 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 POFUT1Q9H488 388 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 YAE1D1Q9NRH1 226 aa13.76□□□□□ -0.21
PDLIM5-216ENST00000511767 H3BSA7 217 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 NCR1O76036 304 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 TACSTD2P09758 323 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 ZNF23P17027 643 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 ERFP50548 548 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 SLC25A1P53007 311 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 PCGF3Q3KNV8 242 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 KRTAP21-3Q3LHN1 58 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 CYB5R2Q6BCY4 276 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 OR2T33Q8NG76 320 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 OR51L1Q8NGJ5 315 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 OR2T4Q8NH00 348 aa13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 IPCEF1Q8WWN9 437 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 UTP4Q969X6 686 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-216ENST00000511767 COQ7Q99807 217 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms