RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 GJC3Q8NFK1 279 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 OR10G2Q8NGC3 310 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 OR4Q3Q8NH05 313 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 KLF14Q8TD94 323 aaPredicted RBP13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 ZNRF4Q8WWF5 429 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 SLC7A6Q92536 515 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 NIPSNAP1Q9BPW8 284 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 OR2J1Q9GZK6 312 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 RACGAP1Q9H0H5 632 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 ELOVL3Q9HB03 270 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 HINT3Q9NQE9 182 aaKnown RBP13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 PLEK2Q9NYT0 353 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 GPR160Q9UJ42 338 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 STARD10Q9Y365 291 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 LHFPL6Q9Y693 200 aa13.79□□□□□ -0.2
PDLIM5-212ENST00000509333 A0A1W2PPW3 197 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 C17orf100A8MU93 164 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 TUBG1P23258 451 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 GGT2P36268 569 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 MPV17P39210 176 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 PPP1CBP62140 327 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 GLO1Q04760 184 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 SPATA46Q5T0L3 261 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 ARL9Q6T311 187 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 CYB561A3Q8NBI2 242 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 ICA1LQ8NDH6 482 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 OR52L1Q8NGH7 329 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 PIMREGQ9BSJ6 248 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 FN3KQ9H479 309 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 NTN4Q9HB63 628 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 TUBG2Q9NRH3 451 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 MRPL22Q9NWU5 206 aaKnown RBP13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 NKIRAS2Q9NYR9 191 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 BAIAP2Q9UQB8 552 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 GRIP1Q9Y3R0 1128 aa13.78□□□□□ -0.2
PDLIM5-212ENST00000509333 IGHV4-61A0A0C4DH41 118 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 INAFM1C9JVW0 142 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 GNGT2O14610 69 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 TLX2O43763 284 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 DOK2O60496 412 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 LILRA1O75019 489 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 FKBP6O75344 327 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 PRKACGP22612 351 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 GCH1P30793 250 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 MAGEB1P43366 347 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 HTR5AP47898 357 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 RASSF2P50749 326 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 MMP15P51511 669 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 ARHGDIAP52565 204 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 PSG7Q13046 419 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 NKPD1Q17RQ9 610 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 SLC36A3Q495N2 470 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 CORO6Q6QEF8 472 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 RFPL4BQ6ZWI9 263 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 SLC37A3Q8NCC5 494 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 RDH5Q92781 318 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 RBM4Q9BWF3 364 aaKnown RBP13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 NMNAT2Q9BZQ4 307 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 BPESC1Q9GZL8 116 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 PDP1Q9P0J1 537 aaPredicted RBP13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 DNAJB9Q9UBS3 223 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 CYB5R1Q9UHQ9 305 aa13.77□□□□□ -0.21
PDLIM5-212ENST00000509333 ARRDC5A6NEK1 342 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 SOX14O95416 240 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 ABHD16AO95870 558 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 DBHP09172 617 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 PYCR1P32322 319 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 TMEM33P57088 247 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 CBX1P83916 185 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 GGTLC2Q14390 218 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 KRTAP27-1Q3LI81 207 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 SLC18B1Q6NT16 456 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 ACSM5Q6NUN0 579 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 TMEM154Q6P9G4 183 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 HS3ST5Q8IZT8 346 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 GTF3AQ92664 365 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 PTP4A1Q93096 173 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 YIPF5Q969M3 257 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 HAVCR1Q96D42 359 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 CMBLQ96DG6 245 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 DCLRE1CQ96SD1 692 aaKnown RBP13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 POFUT1Q9H488 388 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 YAE1D1Q9NRH1 226 aa13.76□□□□□ -0.21
PDLIM5-212ENST00000509333 H3BSA7 217 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 NCR1O76036 304 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 TACSTD2P09758 323 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 ZNF23P17027 643 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 ERFP50548 548 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 SLC25A1P53007 311 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 PCGF3Q3KNV8 242 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 KRTAP21-3Q3LHN1 58 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 CYB5R2Q6BCY4 276 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 OR2T33Q8NG76 320 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 OR51L1Q8NGJ5 315 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 OR2T4Q8NH00 348 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 IPCEF1Q8WWN9 437 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms