RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 TBCCD1Q9NVR7 557 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 MIOXQ9UGB7 285 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 STARD10Q9Y365 291 aa13.36□□□□□ -0.27
CXCL1-202ENST00000509101 CLPSL1A2RUU4 121 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 C12orf71A8MTZ7 269 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 SHOX2O60902 331 aaPredicted RBP13.35□□□□□ -0.27
CXCL1-202ENST00000509101 NDUFA7O95182 113 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 SCG5P05408 212 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 CRYBA2P53672 197 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 FGF12P61328 243 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 RPL27P61353 136 aaKnown RBP13.35□□□□□ -0.27
CXCL1-202ENST00000509101 GPR157Q5UAW9 335 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 C1orf94Q6P1W5 598 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 SLC30A8Q8IWU4 369 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 ATG16L2Q8NAA4 619 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 OR8B3Q8NGG8 313 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 LIPHQ8WWY8 451 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 MEGF10Q96KG7 1140 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 OR8B2Q96RD0 313 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 CGREF1Q99674 301 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 TMEM246Q9BRR3 403 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 CCDC28BQ9BUN5 200 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 PRDM13Q9H4Q3 707 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 EMC7Q9NPA0 242 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 POLE4Q9NR33 117 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 ZNF446Q9NWS9 450 aa13.35□□□□□ -0.27
CXCL1-202ENST00000509101 IGHV3-64DA0A0J9YX35 117 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 KIR2DS1A0A191URI9 304 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 H7C1C5 153 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 IFNL4K9M1U5 179 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 IGF2P01344 180 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 COX5BP10606 129 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 PITPNBP48739 271 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 LCN6P62502 163 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 GUCY1A3Q02108 690 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 FAM201AQ5SY85 155 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 INTS11Q5TA45 600 aaKnown RBP13.34□□□□□ -0.27
CXCL1-202ENST00000509101 FAM205BPQ63HN1 556 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 ASPHD2Q6ICH7 369 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 Q6YL49 198 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 SYT9Q86SS6 491 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 FITM2Q8N6M3 262 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 FNDC8Q8TC99 324 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 SLC7A6Q92536 515 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 HAVCR1Q96D42 359 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 CDADC1Q9BWV3 514 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 NOX4Q9NPH5 578 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 RIMS3Q9UJD0 308 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 HIF3AQ9Y2N7 669 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 SH3GLB1Q9Y371 365 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 MED31Q9Y3C7 131 aa13.34□□□□□ -0.27
CXCL1-202ENST00000509101 HMGB1P1B2RPK0 211 aaPredicted RBP13.33□□□□□ -0.28
CXCL1-202ENST00000509101 SGCEO43556 437 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 OR5F1O95221 314 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 TSPAN15O95858 294 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 MELTFP08582 738 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 TUBG1P23258 451 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 CPT2P23786 658 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 CTXN1P60606 82 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 SCRN3Q0VDG4 424 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 PIN1Q13526 163 aaPredicted RBP13.33□□□□□ -0.28
CXCL1-202ENST00000509101 ZNF404Q494X3 552 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 VASH1Q7L8A9 365 aaPredicted RBP13.33□□□□□ -0.28
CXCL1-202ENST00000509101 NLRC3Q7RTR2 1065 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 MOGAT3Q86VF5 341 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 OR10A6Q8NH74 314 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 RASSF5Q8WWW0 418 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 C7orf26Q96N11 449 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 KAT8Q9H7Z6 458 aaKnown RBP13.33□□□□□ -0.28
CXCL1-202ENST00000509101 TUBG2Q9NRH3 451 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 CLN8Q9UBY8 286 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 RNF114Q9Y508 228 aa13.33□□□□□ -0.28
CXCL1-202ENST00000509101 H0YL77 283 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 SELEP16581 610 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 HLXQ14774 488 aaPredicted RBP13.32□□□□□ -0.28
CXCL1-202ENST00000509101 PDCD1Q15116 288 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 OR2T2Q6IF00 324 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 MICU2Q8IYU8 434 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 TMEM86BQ8N661 226 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 PTP4A1Q93096 173 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 MAGEB18Q96M61 343 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 COG8Q96MW5 612 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 SLC30A2Q9BRI3 323 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 PCGF1Q9BSM1 259 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 PTTG3PQ9NZH4 202 aa13.32□□□□□ -0.28
CXCL1-202ENST00000509101 TRAV27A0A087WT01 109 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 A6NIZ1 184 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 SLC22A31A6NKX4 558 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 C22orf46C9J442 243 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 PHYHO14832 338 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 ANGPT2O15123 496 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 MLNRO43193 412 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 SFTPBP07988 381 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 IFI30P13284 250 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 RAC2P15153 192 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 SRP9P49458 86 aaKnown RBP13.31□□□□□ -0.28
CXCL1-202ENST00000509101 RAP1BP61224 184 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 RAP1AP62834 184 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 NFYCQ13952 458 aa13.31□□□□□ -0.28
CXCL1-202ENST00000509101 TAF9Q16594 264 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms