RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TIMM8AO60220 97 aaPredicted RBP12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 DBHP09172 617 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 FPR3P25089 353 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 NOS3P29474 1203 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 RBMXP38159 391 aaKnown RBP12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 PPP1R8Q12972 351 aaKnown RBP12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 RFX4Q33E94 735 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 CLEC12AQ5QGZ9 265 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 SLC35F1Q5T1Q4 408 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 MBNL2Q5VZF2 373 aaKnown RBP12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 CORO6Q6QEF8 472 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 ARL9Q6T311 187 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 SDR9C7Q8NEX9 313 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 OR9Q2Q8NGE9 314 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 EGLN3Q9H6Z9 239 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 IL1RAPQ9NPH3 570 aa12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 RPRD1BQ9NQG5 326 aaKnown RBP12.6□□□□□ -0.39
UBE2D3-228ENST00000508974 TXNDC12O95881 172 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 RENP00797 406 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 HIST1H1CP16403 213 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 CRABP1P29762 137 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 IFNGR2P38484 337 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 CRYBB2P43320 205 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 MNAT1P51948 309 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 TMEM33P57088 247 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 MRPS11P82912 194 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 PSG7Q13046 419 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 SPRNQ5BIV9 151 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 PGBD2Q6P3X8 592 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 DNM1P34Q6PK57 102 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 GNPDA2Q8TDQ7 276 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 CCL17Q92583 94 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 NSL1Q96IY1 281 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 NKIRAS2Q9NYR9 191 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 ACTR3BQ9P1U1 418 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 TMEFF2Q9UIK5 374 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 STARD10Q9Y365 291 aa12.59□□□□□ -0.39
UBE2D3-228ENST00000508974 IGLV1-36A0A0B4J1U3 117 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 B4DSR2 109 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 CLDN25C9JDP6 229 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 TNFRSF11BO00300 401 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 HLA-DQA2P01906 255 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 GAAP10253 952 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 COX5BP10606 129 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 GSTM3P21266 225 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 GSSP48637 474 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 ERFP50548 548 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 LSM6P62312 80 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 TEKQ02763 1124 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 HFEQ30201 348 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 ZNF620Q6ZNG0 422 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 GLCCI1Q86VQ1 547 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 LINC00346Q8IVM7 164 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 OR6V1Q8N148 313 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 CCDC197Q8NCU1 140 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 NPEPL1Q8NDH3 523 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 OR52E2Q8NGJ4 325 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 OR1F12Q8NHA8 337 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 ELMOD3Q96FG2 381 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 WACQ9BTA9 647 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 RACGAP1Q9H0H5 632 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 PTTG3PQ9NZH4 202 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 B9D1Q9UPM9 204 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 WIPI2Q9Y4P8 454 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 LYVE1Q9Y5Y7 322 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 LHFPL6Q9Y693 200 aa12.58□□□□□ -0.4
UBE2D3-228ENST00000508974 DYSFO75923 2080 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 TCRBV5S2A0A599 114 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 ISPDA4D126 451 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 OR6C6A6NF89 314 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 ICMTO60725 284 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 FAM107AO95990 144 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 TFP02787 698 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 SRP14P37108 136 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 DVL1P1P54792 670 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 LMO4P61968 165 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 TSPAN31Q12999 210 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 HLXQ14774 488 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 SPATS1Q496A3 300 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 MTX3Q5HYI7 312 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 FAM209AQ5JX71 171 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 DHFR2Q86XF0 187 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 PHC2Q8IXK0 858 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 OR5AS1Q8N127 324 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 OR2Z1Q8NG97 314 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 CCDC124Q96CT7 223 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 CMBLQ96DG6 245 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 C1orf159Q96HA4 380 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 CLPTM1LQ96KA5 538 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 BTBD10Q9BSF8 475 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 EGLN1Q9GZT9 426 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 ZNF665Q9H7R5 613 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 CYSLTR2Q9NS75 346 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 TBCCD1Q9NVR7 557 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 HIF1ANQ9NWT6 349 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 VNN3Q9NY84 501 aa12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 PURGQ9UJV8 347 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-228ENST00000508974 U3KQV3 271 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms