RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 OR51G2Q8NGK0 314 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 CT55Q8WUE5 264 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 TMA16Q96EY4 203 aaKnown RBP2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 SMARCD1Q96GM5 515 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 TIMD4Q96H15 378 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 SAMD8Q96LT4 415 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 HDHD3Q9BSH5 251 aaPredicted RBP2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 MED10Q9BTT4 135 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 MAD1L1Q9Y6D9 718 aa2.74□□□□□ -1.97
TOPBP1-206ENST00000508524 PIKFYVEQ9Y2I7 2098 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 CMYA5Q8N3K9 4069 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 IGHV1OR21-1A0A087WYE8 117 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 TLCD2A6NGC4 264 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 VSTM2BA6NLU5 285 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 A8MXQ7 604 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 E9PBE3 544 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 KPNA3O00505 521 aaPredicted RBP2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 SDHDO14521 159 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 DPM1O60762 260 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 TGFAP01135 160 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 P04436 131 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 PLEKP08567 350 aaPredicted RBP2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 RBMY1CP0DJD4 496 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 ICAM2P13598 275 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 CALB2P22676 271 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 TDGF1P3P51864 188 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 MYL6P60660 151 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 GTF2BQ00403 316 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 ZNF235Q14590 738 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 FAM83EQ2M2I3 478 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 DEFB116Q30KQ4 102 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 SPECC1LQ69YQ0 1117 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 CTRB2Q6GPI1 263 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 C11orf71Q6IPW1 123 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 CCDC137Q6PK04 289 aaKnown RBP2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 ERASQ7Z444 233 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 C6orf120Q7Z4R8 191 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 C12orf56Q8IXR9 622 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 C6orf223Q8N319 242 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 OR4D9Q8NGE8 314 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 BRSK1Q8TDC3 778 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 OR8D1Q8WZ84 308 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 AKR1E2Q96JD6 320 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 TSNARE1Q96NA8 513 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 VPS35Q96QK1 796 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 ULBP3Q9BZM4 244 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 LHX9Q9NQ69 397 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 SMPD3Q9NY59 655 aaPredicted RBP2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 SH3BGRL2Q9UJC5 107 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 B9D1Q9UPM9 204 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 FADS3Q9Y5Q0 445 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 SEC16AO15027 2179 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 RYR1P21817 5038 aa2.73□□□□□ -1.97
TOPBP1-206ENST00000508524 MYH11P35749 1972 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 IGKV1D-17A0A075B6S4 117 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 PPIAL4EA0A075B759 164 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 PPIAL4CA0A0B4J2A2 164 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 A0A0U1RQS6 177 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 PPIAL4DF5H284 164 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 IGLV3-27P01718 113 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 PPIAL4FP0DN26 164 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 PAICSP22234 425 aaKnown RBP2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 CASP14P31944 242 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 LEPP41159 167 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 IRF4Q15306 451 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 TRIP10Q15642 601 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 NIPAL3Q6P499 406 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 Q6ZS92 163 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 CENPUQ71F23 418 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 GCNT2Q8N0V5 402 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 RNF182Q8N6D2 247 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 OR10G2Q8NGC3 310 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 OR52B4Q8NGK2 314 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 RPL3LQ92901 407 aaKnown RBP2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 HIST1H4GQ99525 98 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 SELENOIQ9C0D9 397 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 ILKAPQ9H0C8 392 aaPredicted RBP2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 RAB17Q9H0T7 212 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 FBXO44Q9H4M3 255 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 ZSCAN16Q9H4T2 348 aaPredicted RBP2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 FBXO8Q9NRD0 319 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 BTRCQ9Y297 605 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 OR51B4Q9Y5P0 310 aa2.72□□□□□ -1.97
TOPBP1-206ENST00000508524 PCM1Q15154 2024 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 IGKV1D-8A0A087WSZ0 117 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 A0A0G2JLM5 398 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 A0A1B0GUH1 482 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 A6NIZ1 184 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 CCL21O00585 134 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 TPST2O60704 377 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 IGKV1-17P01599 117 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 FGF1P05230 155 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 TPSB2P20231 275 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 AK4P27144 223 aaPredicted RBP2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 CA7P43166 264 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 GFERP55789 205 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 RAP1BP61224 184 aa2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 YWHAGP61981 247 aaKnown RBP eCLIP2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 RPS21P63220 83 aaKnown RBP2.71□□□□□ -1.98
TOPBP1-206ENST00000508524 TFF3Q07654 80 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms