RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RWDD4Q6NW29 188 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 PRMT9Q6P2P2 845 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 SLC35D2Q76EJ3 337 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 ABHD13Q7L211 337 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 RALGPS2Q86X27 583 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 ST13P4Q8IZP2 240 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 KIF2BQ8N4N8 673 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR10G9Q8NGN4 311 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR51F2Q8NH61 342 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 LILRB4Q8NHJ6 448 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CT45A3Q8NHU0 189 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 NDNFQ8TB73 568 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 MCOLN3Q8TDD5 553 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 ACER1Q8TDN7 264 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 TOP1MTQ969P6 601 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 FAM122AQ96E09 287 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 NRIP2Q9BQI9 281 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 HINT2Q9BX68 163 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 PRRG3Q9BZD7 231 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR51J1Q9H342 316 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 UBE2ZQ9H832 354 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 TREM1Q9NP99 234 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 FAM49BQ9NUQ9 324 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CLN6Q9NWW5 311 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CLCF1Q9UBD9 225 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 ZMAT5Q9UDW3 170 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 ZNF629Q9UEG4 869 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 NUFIP1Q9UHK0 495 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 MROH7Q68CQ1 1323 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 CENPJQ9HC77 1338 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 MAPK8IP3Q9UPT6 1336 aa2.88□□□□□ -1.95
TRAPPC13-209ENST00000508304 A0A0G2JN53 185 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 PRSS37A4D1T9 235 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 KDELR3O43731 214 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 FAM189A1O60320 539 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 TDP2O95551 362 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 RAB3DO95716 219 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 HPNP05981 417 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 FOLR1P15328 257 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 TCP1P17987 556 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 WARSP23381 471 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 IL32P24001 234 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 CFHR2P36980 270 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 NBL1P41271 181 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 STX17P56962 302 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 ATP6V0D1P61421 351 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 SYCP1Q15431 976 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 VAMP3Q15836 100 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 USF2Q15853 346 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 RPEL1Q2QD12 228 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 VAX1Q5SQQ9 334 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 THOC7Q6I9Y2 204 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 ERICH5Q6P6B1 374 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 ZNF621Q6ZSS3 439 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 MBOAT2Q6ZWT7 520 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR2W3Q7Z3T1 314 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 RBM45Q8IUH3 476 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 DUSP18Q8NEJ0 188 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR2L5Q8NG80 312 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR6K6Q8NGW6 343 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 C7orf33Q8WU49 177 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 LRRC29Q8WV35 223 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 CCDC124Q96CT7 223 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 RCN3Q96D15 328 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 DNAJC19Q96DA6 116 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 DUS3LQ96G46 650 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 OR11A1Q9GZK7 315 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 NEUROG2Q9H2A3 272 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 CHMP4BQ9H444 224 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 KIR3DX1Q9H7L2 352 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 PATZ1Q9HBE1 687 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 ANKHQ9HCJ1 492 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 AQRO60306 1485 aaKnown RBP eCLIP2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 ADGRA3Q8IWK6 1321 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 PLEKHG1Q9ULL1 1385 aa2.87□□□□□ -1.95
TRAPPC13-209ENST00000508304 THSD7BQ9C0I4 1608 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 EPOPA6NHQ4 379 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 SLC22A20A6NK97 555 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 ZFP92A6NM28 416 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 GJE1A6NN92 205 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 HACD1B0YJ81 288 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 E7EWF7 191 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 H3BN98 237 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 RFXANKO14593 260 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 CETN3O15182 167 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 ENTPD5O75356 428 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 SMC2O95347 1197 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 UTS2O95399 124 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 FABP3P05413 133 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 RHOCP08134 193 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 P0C879 139 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 PNMA6AP0CW24 399 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 RAB3BP20337 219 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 RAB5AP20339 215 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 HTR1EP28566 365 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 HRH1P35367 487 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 MAS1LP35410 378 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 GPX4P36969 197 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 CEACAM3P40198 252 aa2.86□□□□□ -1.95
TRAPPC13-209ENST00000508304 CSKP41240 450 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms