RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 RBPMSQ93062 196 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ERMAPQ96PL5 475 aaPredicted RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 SORCS2Q96PQ0 1159 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 FYTTD1Q96QD9 318 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 OR5B2Q96R09 309 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 CHCHD6Q9BRQ6 235 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF416Q9BWM5 594 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 QRSL1Q9H0R6 528 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 C11orf54Q9H0W9 315 aaPredicted RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 TPT1P8Q9HAU6 139 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 CTPS2Q9NRF8 586 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 PCDHB16Q9NRJ7 776 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 PLSCR3Q9NRY6 295 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 MCUBQ9NWR8 336 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 NDUFB11Q9NX14 153 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ERVK13-1Q9NX77 482 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 PDP1Q9P0J1 537 aaPredicted RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 DIMT1Q9UNQ2 313 aaKnown RBP7.08□□□□□ -1.28
SCN1A-207ENST00000507401 GSTK1Q9Y2Q3 226 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 VPS13CQ709C8 3753 aa7.08□□□□□ -1.28
SCN1A-207ENST00000507401 ZFHX3Q15911 3703 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 DSPPQ9NZW4 1301 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 DSCAMO60469 2012 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 TMED7-TICAM2A0A0A6YYA0 188 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 A0A0G2JPF8 293 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 CDHR4A6H8M9 788 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 HNRNPCL2B2RXH8 293 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 HNRNPCL3B7ZW38 293 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PAHP00439 452 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 APOC1P02654 83 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 C1QCP02747 245 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 MT-ND1P03886 318 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 CSF3P09919 207 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 HNRNPCL4P0DMR1 293 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 TFPIP10646 304 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 SLC2A2P11168 524 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 ARSBP15848 533 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 POLR2HP52434 150 aaKnown RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 CRISP3P54108 245 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 MTPNP58546 118 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 SNRPGP62308 76 aaKnown RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 SLC35A1P78382 337 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 ST3GAL4Q11206 333 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 COX10Q12887 443 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PXDC1Q5TGL8 231 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PRAMEF8Q5VWM4 474 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PRAMEF7Q5VXH5 474 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 LAMTOR1Q6IAA8 161 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 TMEM65Q6PI78 240 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF704Q6ZNC4 412 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 CBLL1Q75N03 491 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PGAP1Q75T13 922 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 BIVMQ86UB2 503 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 COMMD7Q86VX2 200 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 SLC30A8Q8IWU4 369 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 OR8H3Q8N146 312 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 WFDC11Q8NEX6 87 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 OR52P1PQ8NH57 321 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 OR10A6Q8NH74 314 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PIGXQ8TBF5 258 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 TMEM163Q8TC26 289 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF431Q8TF32 576 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 SLC38A5Q8WUX1 472 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 CNOT9Q92600 299 aaKnown RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 KISS1RQ969F8 398 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 OTULINQ96BN8 352 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 S100PBPQ96BU1 408 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 DDIT4LQ96D03 193 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PLPPR2Q96GM1 343 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 C18orf12Q96KH6 178 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 KCNJ15Q99712 375 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 SOSTQ9BQB4 213 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 CPPED1Q9BRF8 314 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 NAA11Q9BSU3 229 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 POTEKPQ9BYX7 375 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 MED28Q9H204 178 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PIF1Q9H611 641 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 ESRP2Q9H6T0 727 aaKnown RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 BCL2L10Q9HD36 194 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 IFT46Q9NQC8 304 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 SLC6A13Q9NSD5 602 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 C14orf119Q9NWQ9 140 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 PARPBPQ9NWS1 579 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF224Q9NZL3 707 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 P2RX2Q9UBL9 471 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 BAIAP2Q9UQB8 552 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 KCNK7Q9Y2U2 307 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 TMED7Q9Y3B3 224 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 ALG5Q9Y673 324 aa7.07□□□□□ -1.28
SCN1A-207ENST00000507401 RAI1Q7Z5J4 1906 aaPredicted RBP7.07□□□□□ -1.28
SCN1A-207ENST00000507401 ARID1AO14497 2285 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 IGHV3-15A0A0B4J1V0 119 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 PQLC2LA1A4F0 135 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 ZNF716A6NP11 495 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 C9JVG2 144 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 INMT-MINDY4F8WBC2 141 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 LYRM1O43325 122 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 PRAF2O60831 178 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 TMEM127O75204 238 aa7.06□□□□□ -1.28
SCN1A-207ENST00000507401 SNAPINO95295 136 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms