RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 MTPNP58546 118 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 UBE2IP63279 158 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SELENOWP63302 87 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PSPHP78330 225 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 BTN3A2P78410 334 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 MRPS22P82650 360 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 MED21Q13503 144 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SERTAD2Q14140 314 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 FAM53BQ14153 422 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CAPRIN1Q14444 709 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RGNQ15493 299 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TRIP10Q15642 601 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ZIC1Q15915 447 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ZSWIM7Q19AV6 140 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 C17orf58Q2M2W7 97 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 HKDC1Q2TB90 917 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 HFEQ30201 348 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RFX4Q33E94 735 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 C14orf28Q4W4Y0 310 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 EIPR1Q53HC9 387 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CMPK2Q5EBM0 449 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 VWA2Q5GFL6 755 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TOR1AIP1Q5JTV8 583 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PAGE3Q5JUK9 113 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ATAD3BQ5T9A4 648 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PRAMEF7Q5VXH5 474 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4F3Q6IEY1 312 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OR52E8Q6IFG1 317 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 FAM71E1Q6IPT2 247 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 REEP3Q6NUK4 255 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC48A1Q6P1K1 146 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ZCCHC12Q6PEW1 402 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 WDR74Q6RFH5 385 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ANGPTL8Q6UXH0 198 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 LRRC74BQ6ZQY2 392 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 FAM92BQ6ZTR7 304 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CYP4Z1Q86W10 505 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PAQR7Q86WK9 346 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 C17orf82Q86X59 251 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CALHM3Q86XJ0 350 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 MARCH9Q86YJ5 346 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 HIPK1Q86Z02 1210 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 KRTAP11-1Q8IUC1 163 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CCDC71Q8IV32 467 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 MICU2Q8IYU8 434 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC22A18ASQ8N1D0 253 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SVOPLQ8N434 492 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ARL14Q8N4G2 192 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 LINC00471Q8N535 108 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 C2orf73Q8N5S3 287 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TMCO5AQ8N6Q1 288 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CSNK1A1LQ8N752 337 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RNF148Q8N7C7 305 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TTC29Q8NA56 475 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SUMF1Q8NBK3 374 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF740Q8NDX6 193 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OR4K14Q8NGD5 310 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OR6M1Q8NGM8 313 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OR10A6Q8NH74 314 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CLHC1Q8NHS4 586 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PSMA8Q8TAA3 256 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC37A2Q8TED4 501 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ZFP90Q8TF47 636 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PYDC1Q8WXC3 89 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RLN3Q8WXF3 142 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TM4SF18Q96CE8 201 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 MS4A6EQ96DS6 147 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TM4SF19Q96DZ7 209 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 NRBF2Q96F24 287 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CENPNQ96H22 339 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RBM18Q96H35 190 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 PYURFQ96I23 114 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TEX37Q96LM6 180 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RDH12Q96NR8 316 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OR2A5Q96R48 311 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC35A5Q9BS91 424 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ST6GALNAC5Q9BVH7 336 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CHID1Q9BWS9 393 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 EBPLQ9BY08 206 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 OR51B5Q9H339 312 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 XKR8Q9H6D3 395 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 TMEM38AQ9H6F2 299 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ARMC7Q9H6L4 198 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 RPF2Q9H7B2 306 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 MARCH7Q9H992 704 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 FANCEQ9HB96 536 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ANKHQ9HCJ1 492 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ACOXLQ9NUZ1 547 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 DCAF13Q9NV06 445 aaKnown RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 EXD2Q9NVH0 621 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CMTM6Q9NX76 183 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 GIN1Q9NXP7 522 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 SLC25A37Q9NYZ2 338 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CALML5Q9NZT1 146 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 VAPAQ9P0L0 249 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 AKAP7Q9P0M2 348 aaPredicted RBP1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ZNF581Q9P0T4 197 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 CIDEBQ9UHD4 219 aa1.98□□□□□ -2.09
TOPBP1-205ENST00000506779 ENOPH1Q9UHY7 261 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms