RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 FAM189A1O60320 539 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 B4GALT2O60909 372 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 TNFSF15O95150 251 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 IGLV1-47P01700 117 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 DUX4L4P0CJ87 422 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 LIPCP11150 499 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 TNNI1P19237 187 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 ELK1P19419 428 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 CXCR2P25025 360 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 GPM6AP51674 278 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 ASPHQ12797 758 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 DNAJC3Q13217 504 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 ZNF630Q2M218 657 aaPredicted RBP4.09□□□□□ -1.75
HERC4-213ENST00000506515 KLHL38Q2WGJ6 581 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 PARP15Q460N3 678 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 CCDC14Q49A88 953 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 C11orf71Q6IPW1 123 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 IL34Q6ZMJ4 242 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 Q6ZN92 141 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 SH2D6Q7Z4S9 175 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 SLC26A11Q86WA9 606 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 C6orf223Q8N319 242 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 MAGEE2Q8TD90 523 aaPredicted RBP4.09□□□□□ -1.75
HERC4-213ENST00000506515 UFD1Q92890 307 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 CMTM7Q96FZ5 175 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 HIST1H4GQ99525 98 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 ACTR6Q9GZN1 396 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 ABCB10Q9NRK6 738 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 COX16Q9P0S2 106 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 SEC14L3Q9UDX4 400 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 PIGLQ9Y2B2 252 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 ABCA12Q86UK0 2595 aa4.09□□□□□ -1.75
HERC4-213ENST00000506515 OBSL1O75147 1896 aa4.09□□□□□ -1.76
HERC4-213ENST00000506515 ANK1P16157 1881 aa4.09□□□□□ -1.76
HERC4-213ENST00000506515 NSG1A0A0A6YYJ2 146 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 VPS37CA5D8V6 355 aaPredicted RBP4.08□□□□□ -1.76
HERC4-213ENST00000506515 SNTNA6NMZ2 147 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 GFYI3L273 518 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 HCRTR1O43613 425 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 KLK3P07288 261 aaPredicted RBP4.08□□□□□ -1.76
HERC4-213ENST00000506515 LONP1P36776 959 aaKnown RBP4.08□□□□□ -1.76
HERC4-213ENST00000506515 DDOSTP39656 456 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 PRPS1P60891 318 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 CDK16Q00536 496 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 NSDHLQ15738 373 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 MICBQ29980 383 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 KRTAP21-3Q3LHN1 58 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 PAGE3Q5JUK9 113 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 UTS2BQ765I0 119 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 CENPQQ7L2Z9 268 aaPredicted RBP4.08□□□□□ -1.76
HERC4-213ENST00000506515 CCDC71LQ8N9Z2 235 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 CCDC112Q8NEF3 446 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 RNF139Q8WU17 664 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 SHC3Q92529 594 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 TMEM101Q96IK0 257 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 TRIM62Q9BVG3 475 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 NEUROG2Q9H2A3 272 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 RNF167Q9H6Y7 350 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 FN3KRPQ9HA64 309 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 CSNK1G1Q9HCP0 422 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 ASCL3Q9NQ33 180 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 PRSS16Q9NQE7 514 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 DYRK4Q9NR20 520 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 ASF1AQ9Y294 204 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 CDH10Q9Y6N8 788 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 FLNCQ14315 2725 aa4.08□□□□□ -1.76
HERC4-213ENST00000506515 TEP1Q99973 2627 aaKnown RBP4.08□□□□□ -1.76
HERC4-213ENST00000506515 USP9YO00507 2555 aaPredicted RBP4.07□□□□□ -1.76
HERC4-213ENST00000506515 A8MUA0 341 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 FCMRO60667 390 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 IGHV4-34P06331 123 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 SEC61GP60059 68 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 CST6Q15828 149 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 HNRNPA1L2Q32P51 320 aaKnown RBP4.07□□□□□ -1.76
HERC4-213ENST00000506515 FILIP1LQ4L180 1135 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 C1orf100Q5SVJ3 147 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 OR2A2Q6IF42 318 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 TMIGD1Q6UXZ0 262 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 TRIM69Q86WT6 500 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 ACOT4Q8N9L9 421 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 DCAF4L2Q8NA75 395 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 OR51S1Q8NGJ8 323 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 OR1L4Q8NGR5 311 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 FAM110BQ8TC76 370 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 KIAA1143Q96AT1 154 aaPredicted RBP4.07□□□□□ -1.76
HERC4-213ENST00000506515 OXGR1Q96P68 337 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 NPY6RQ99463 290 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 SLC39A3Q9BRY0 314 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 SLC25A22Q9H936 323 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 PLGRKTQ9HBL7 147 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 STOML2Q9UJZ1 356 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 TLN1Q9Y490 2541 aaKnown RBP4.07□□□□□ -1.76
HERC4-213ENST00000506515 NBASA2RRP1 2371 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 CENPEQ02224 2701 aa4.07□□□□□ -1.76
HERC4-213ENST00000506515 MUC22E2RYF6 1773 aaPredicted RBP4.07□□□□□ -1.76
HERC4-213ENST00000506515 C2CD3Q4AC94 2353 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 ICE1Q9Y2F5 2266 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 UNC13CQ8NB66 2214 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 ESPL1Q14674 2120 aa4.06□□□□□ -1.76
HERC4-213ENST00000506515 TDRD6O60522 2096 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms