RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MBOAT1Q6ZNC8 495 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 BHLHA15Q7RTS1 189 aaPredicted RBP2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 NEGR1Q7Z3B1 354 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 IQCKQ8N0W5 287 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 GTPBP8Q8N3Z3 284 aaPredicted RBP2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 OR10AD1Q8NGE0 317 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 OR52P1PQ8NH57 321 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 LRRC29Q8WV35 223 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 ECHDC3Q96DC8 303 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 L3HYPDHQ96EM0 354 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 CAMK2N2Q96S95 79 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 MICU1Q9BPX6 476 aa2.19□□□□□ -2.06
TOPBP1-204ENST00000505804 COL27A1Q8IZC6 1860 aaPredicted RBP2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 IGKV1D-17A0A075B6S4 117 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 OR6C74A6NCV1 312 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 SMKR1H3BMG3 65 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 EIF3HO15372 352 aaKnown RBP eCLIP2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 RRP8O43159 456 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 CCNE2O96020 404 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 FTH1P02794 183 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 ZNF806P0C7X5 589 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 POLR2MP0CAP2 368 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 RAB3AP20336 220 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 RRM2P31350 389 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 OPRK1P41145 380 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 HCAR3P49019 387 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 P2RX1P51575 399 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 PRMT2P55345 433 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 EIF3EP60228 445 aaKnown RBP2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 SELENBP1Q13228 472 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 PRSS8Q16651 343 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 KRTAP13-2Q52LG2 175 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 CCDC183Q5T5S1 534 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 GPR107Q5VW38 600 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 RAET1LQ5VY80 246 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 C22orf42Q6IC83 251 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 SLC16A14Q7RTX9 510 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 OSR2Q8N2R0 312 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 OR4A4PQ8NGN8 299 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 RNF157Q96PX1 679 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 RNF5Q99942 180 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 VANGL2Q9ULK5 521 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 HYOU1Q9Y4L1 999 aa2.18□□□□□ -2.06
TOPBP1-204ENST00000505804 YEATS2Q9ULM3 1422 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 A0A1B0GW55 424 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 OR2AG2A6NM03 316 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 LYRM9A8MSI8 78 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 C9JVG2 144 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 SIRPB1O00241 398 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 BPY2O14599 106 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 CLDN11O75508 207 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 WBP4O75554 376 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 H6PDO95479 791 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 IGKV1-17P01599 117 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 SERPINE2P07093 398 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DCNP07585 359 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DUX4L2P0CJ85 424 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DUX4L3P0CJ86 424 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DUX4L5P0CJ88 424 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DUX4L6P0CJ89 424 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DUX4L7P0CJ90 424 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 C1GALT1C1LP0DN25 315 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 CDKN2DP55273 166 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 KRTAP10-1P60331 282 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 CACNG7P62955 275 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 CDC20Q12834 499 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 QPRTQ15274 297 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 ARMC12Q5T9G4 340 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 ZFP1Q6P2D0 407 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 CMC1Q7Z7K0 106 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 WDFY1Q8IWB7 410 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 NPWQ8N729 165 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 LINC01560Q8TB33 94 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 NUBPLQ8TB37 319 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 CAPSLQ8WWF8 208 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 N4BP2L2Q92802 583 aaPredicted RBP2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 SLC38A4Q969I6 547 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 PTX4Q96A99 478 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 ZNF488Q96MN9 340 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DOK1Q99704 481 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 CCDC77Q9BR77 488 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 TIMM29Q9BSF4 260 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 OR52D1Q9H346 318 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 SLC38A10Q9HBR0 1119 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 CCDC59Q9P031 241 aaKnown RBP2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DUX4Q9UBX2 424 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 MARCOQ9UEW3 520 aaPredicted RBP2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 WIF1Q9Y5W5 379 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 DOCK8Q8NF50 2099 aa2.17□□□□□ -2.06
TOPBP1-204ENST00000505804 IGLV3-12A0A075B6K2 115 aa2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 TRBV11-1A0A0K0K1C0 115 aa2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 C5orf63A6NC05 138 aa2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 H7C417 338 aa2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 NDUFAB1O14561 156 aa2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 EIF4E2O60573 245 aaKnown RBP2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 REM1O75628 298 aa2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 IGLV3-19P01714 112 aa2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 ARG1P05089 322 aa2.16□□□□□ -2.06
TOPBP1-204ENST00000505804 CTSLP07711 333 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms