RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 HHIPL1Q96JK4 782 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 TRIM2Q9C040 744 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 UNKLQ9H9P5 680 aaKnown RBP6.87□□□□□ -1.31
NEDD9-208ENST00000504387 SPACA1Q9HBV2 294 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 GRHPRQ9UBQ7 328 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 ADAM29Q9UKF5 820 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 ENTPD2Q9Y5L3 495 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 ARHGEF17Q96PE2 2063 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-208ENST00000504387 LOC101059948A0A1B0GTJ6 334 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 C17orf113A0A1B0GUU1 675 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 C9orf170A2RU37 121 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 OR4C45A6NMZ5 311 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF727A8MUV8 499 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 ITGB2P05107 769 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 RNH1P13489 461 aaKnown RBP6.87□□□□□ -1.31
NEDD9-208ENST00000504387 DNASE1L1P49184 302 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 PMPCAQ10713 525 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 ILF3Q12906 894 aaKnown RBP eCLIP6.87□□□□□ -1.313e-10■■■□□ 16.4
NEDD9-208ENST00000504387 C4orf17Q53FE4 359 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 TMEM35AQ53FP2 167 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 ALG10Q5BKT4 473 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 CBLN3Q6UW01 205 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF550Q7Z398 422 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 MISPQ8IVT2 679 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 DMRTC2Q8IXT2 367 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-208ENST00000504387 TMIEQ8NEW7 156 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 BADQ92934 168 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 RNF166Q96A37 237 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-208ENST00000504387 RERGQ96A58 199 aaPredicted RBP6.87□□□□□ -1.31
NEDD9-208ENST00000504387 RFNGQ9Y644 331 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 BRWD1Q9NSI6 2320 aa6.87□□□□□ -1.31
NEDD9-208ENST00000504387 CCDC163A0A0D9SF12 145 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 B3GALT2O43825 422 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 GLCEO94923 617 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 CISD3P0C7P0 127 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ACAA2P42765 397 aaKnown RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 KIR3DL2P43630 455 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 MRPS10P82664 201 aaKnown RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 MFGE8Q08431 387 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 PJVKQ0ZLH3 352 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ENPP2Q13822 863 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ELOCQ15369 112 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 AWAT1Q58HT5 328 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 LINC01590Q5TEZ4 76 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 OR2A2Q6IF42 318 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 RPL13AP3Q6NVV1 102 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 FAM180AQ6UWF9 173 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 UNQ6494/PRO21346Q6UXR6 183 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 Q6ZRG5 221 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 LURAP1LQ8IV03 231 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 DEFB119Q8N690 84 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 CAMKVQ8NCB2 501 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 RGCCQ9H4X1 137 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 FGF22Q9HCT0 170 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 RCC2Q9P258 522 aaKnown RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 TBC1D29Q9UFV1 150 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 DHDHQ9UQ10 334 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 EMC9Q9Y3B6 208 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 SPACA6W5XKT8 324 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 UNC13CQ8NB66 2214 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 LOC100289279A0A1B0GTE1 492 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 HCRTR1O43613 425 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 RDH16O75452 317 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 SLC34A2O95436 690 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 IFNA4P05014 189 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 CD63P08962 238 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 MDKP21741 143 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 HTR2CP28335 458 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 VEGFBP49765 207 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ACTBP60709 375 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ACTG1P63261 375 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 S100A12P80511 92 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 DEFA6Q01524 100 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 BIKQ13323 160 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 RAB32Q13637 225 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ACTBL2Q562R1 376 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 C17orf78Q8N4C9 275 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 EID2Q8N6I1 236 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF383Q8NA42 475 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 PNLDC1Q8NA58 520 aaKnown RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 OR5D18Q8NGL1 313 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 NPRL2Q8WTW4 380 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 MITD1Q8WV92 249 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 BSCL2Q96G97 398 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 C19orf43Q9BQ61 176 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 FAM83CQ9BQN1 747 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ST6GALNAC5Q9BVH7 336 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 BANF2Q9H503 90 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 SMCO4Q9NRQ5 59 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 HAO2Q9NYQ3 351 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 C7orf77A4D0Y5 90 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF749O43361 778 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 SLC16A7O60669 478 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF354AO60765 605 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-208ENST00000504387 WISP1O95388 367 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 PRH1P02810 166 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 OPN1LWP04000 364 aa6.86□□□□□ -1.31
NEDD9-208ENST00000504387 MAPK3P27361 379 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms