RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CD1EP15812 388 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 GLB1P16278 677 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 TGM4P49221 684 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 GABRG1Q8N1C3 465 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 LANCL2Q9NS86 450 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 A0A0A6YYD5 115 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 ST8SIA3O43173 380 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 PDGFAP04085 211 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 GUSBP08236 651 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 CT45A6P0DMU7 189 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 CT45A5P0DMU8 189 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 CT45A7P0DMV0 189 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 CT45A8P0DMV1 189 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 CT45A9P0DMV2 189 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 B4GALNT1Q00973 533 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 CT45A2Q5DJT8 189 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 TMEM196Q5HYL7 178 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 CT45A1Q5HYN5 189 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 FBXL6Q8N531 539 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 CT45A3Q8NHU0 189 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 C11orf40Q8WZ69 217 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 MED18Q9BUE0 208 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 KLF13Q9Y2Y9 288 aaPredicted RBP15.04■□□□□ -0
PCDHA1-203ENST00000504120 A0A1B0GTL3 188 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 IGHV3-9P01782 118 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 HLA-DOBP13765 273 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 FABP5Q01469 135 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 TPBGQ13641 420 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 SLC35G3Q8N808 338 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 BHLHE23Q8NDY6 225 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 KCNE4Q8WWG9 221 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 SLC22A11Q9NSA0 550 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 EXO1Q9UQ84 846 aaKnown RBP15.04■□□□□ -0
PCDHA1-203ENST00000504120 IFITM5A6NNB3 132 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 M0R135 149 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 ARR3P36575 388 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 RPS23P62266 143 aaKnown RBP15.04■□□□□ -0
PCDHA1-203ENST00000504120 LFNGQ8NES3 379 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 ZNF799Q96GE5 643 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 POLDIP2Q9Y2S7 368 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 R4GMQ9 66 aa15.04■□□□□ -0
PCDHA1-203ENST00000504120 F6UZH7 168 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 TMEM127O75204 238 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 DUSP1P28562 367 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 EVX1P49640 407 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 LHFPL2Q6ZUX7 228 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 SUMF1Q8NBK3 374 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 OR13C8Q8NGS7 320 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 OR51F2Q8NH61 342 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 H1FXQ92522 213 aaKnown RBP15.03■□□□□ -0
PCDHA1-203ENST00000504120 FAM234AQ9H0X4 552 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 POMT2Q9UKY4 750 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 URB1O60287 2271 aaKnown RBP15.03■□□□□ -0
PCDHA1-203ENST00000504120 A0A1W2PNR3 127 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 BATFQ16520 125 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 FAM122BQ7Z309 247 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 NAA40Q86UY6 237 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 CATSPERDQ86XM0 798 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 BOD1Q96IK1 185 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 DDOQ99489 341 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 JAM3Q9BX67 310 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 ARV1Q9H2C2 271 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 TAF9BQ9HBM6 251 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 SLCO1B1Q9Y6L6 691 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 OIP5O43482 229 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 GNB3P16520 340 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 PTAFRP25105 342 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 EDDM3AQ14507 147 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 LTB4R2Q9NPC1 389 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 HIF1ANQ9NWT6 349 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 SSC5DA1L4H1 1573 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 OR2F2O95006 317 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 HPNP05981 417 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 ALOX5APP20292 161 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 NKX2-1P43699 371 aaPredicted RBP15.03■□□□□ -0
PCDHA1-203ENST00000504120 OR2F1Q13607 317 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 CORO6Q6QEF8 472 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 SLC38A9Q8NBW4 561 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 OR52H1Q8NGJ2 320 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 OR10R2Q8NGX6 335 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 CTSFQ9UBX1 484 aa15.03■□□□□ -0
PCDHA1-203ENST00000504120 TAAR5O14804 337 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 HLA-HP01893 362 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 OR8U8P0C7N1 319 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 PRR35P0CG20 571 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 PSMB3P49720 205 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 EMDP50402 254 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 SLC17A1Q14916 467 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 OR8G1Q15617 311 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 GCNT2Q8N0V5 402 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 EGLN1Q9GZT9 426 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 PIGMQ9H3S5 423 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 SLC5A6Q9Y289 635 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 SMIM15Q7Z3B0 74 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 CALHM3Q86XJ0 350 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 SDK1Q7Z5N4 2213 aa15.02■□□□□ -0
PCDHA1-203ENST00000504120 A0A087WZY1 265 aa15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF891A8MT65 544 aaPredicted RBP15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 RRP8O43159 456 aaKnown RBP15.02□□□□□ -0.01
PCDHA1-203ENST00000504120 OR2A14Q96R47 310 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms